RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PPP1R14BQ96C90 147 aa9.42□□□□□ -0.9
HDAC1-209ENST00000484305 WDR12Q9GZL7 423 aaKnown RBP9.42□□□□□ -0.9
HDAC1-209ENST00000484305 FAM240BA0A1B0GVZ2 78 aa9.41□□□□□ -0.9
HDAC1-209ENST00000484305 C7orf66A4D0T2 115 aa9.41□□□□□ -0.9
HDAC1-209ENST00000484305 FAM25EA8MYX2 175 aa9.41□□□□□ -0.9
HDAC1-209ENST00000484305 CFDP00746 253 aaPredicted RBP9.41□□□□□ -0.9
HDAC1-209ENST00000484305 C4BPBP20851 252 aa9.41□□□□□ -0.9
HDAC1-209ENST00000484305 TAS2R30P59541 319 aa9.41□□□□□ -0.9
HDAC1-209ENST00000484305 RRAS2P62070 204 aaPredicted RBP9.41□□□□□ -0.9
HDAC1-209ENST00000484305 PMS2P11Q13670 270 aa9.41□□□□□ -0.9
HDAC1-209ENST00000484305 C12orf45Q8N5I9 185 aaPredicted RBP9.41□□□□□ -0.9
HDAC1-209ENST00000484305 BPIFCQ8NFQ6 507 aa9.41□□□□□ -0.9
HDAC1-209ENST00000484305 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
HDAC1-209ENST00000484305 FBXL17Q9UF56 701 aa9.41□□□□□ -0.9
HDAC1-209ENST00000484305 RYR2Q92736 4967 aa9.41□□□□□ -0.9
HDAC1-209ENST00000484305 CXorf65A6NEN9 183 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 TSC22D2O75157 780 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 SPP1P10451 314 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 ATF4P18848 351 aaPredicted RBP9.4□□□□□ -0.9
HDAC1-209ENST00000484305 ORM2P19652 201 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 DEFB1P60022 68 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 DLK1P80370 383 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 ASAH1Q13510 395 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 ZNF846Q147U1 533 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 MZT2BQ6NZ67 158 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 MORN3Q6PF18 240 aaPredicted RBP9.4□□□□□ -0.9
HDAC1-209ENST00000484305 CYP2G1PQ6ZSU1 146 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 OR8I2Q8N0Y5 310 aa9.4□□□□□ -0.9
HDAC1-209ENST00000484305 SACSQ9NZJ4 4579 aa9.4□□□□□ -0.91
HDAC1-209ENST00000484305 C5orf51A6NDU8 294 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 ZNF98A6NK75 572 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 SOCS3O14543 225 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 DEFB4AO15263 64 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 UPK1BO75841 260 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 IL5P05113 134 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 IFITM3Q01628 133 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 ARL16Q0P5N6 197 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 TMEM217Q8N7C4 229 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 OR10P1Q8NGE3 313 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 OR1B1Q8NGR6 318 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 C17orf77Q96MU5 243 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 SLC25A32Q9H2D1 315 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 SLC25A22Q9H936 323 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 CLEC5AQ9NY25 188 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 PTTG2Q9NZH5 202 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 DOK5Q9P104 306 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 SLC45A2Q9UMX9 530 aa9.39□□□□□ -0.91
HDAC1-209ENST00000484305 LSM5Q9Y4Y9 91 aaKnown RBP9.39□□□□□ -0.91
HDAC1-209ENST00000484305 FNDC10F2Z333 226 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 H3BMM0 161 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 K7EPK0 472 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 ID1P41134 155 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 PSMB3P49720 205 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 TMEM41BQ5BJD5 291 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 GDF5OSQ5U4N7 250 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 CSNK1G2-AS1Q8NCQ2 148 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 C2orf50Q96LR7 162 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 LINC00052Q96N35 136 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 TMEM147Q9BVK8 224 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
HDAC1-209ENST00000484305 NPVFQ9HCQ7 196 aa9.38□□□□□ -0.91
HDAC1-209ENST00000484305 L7N2F9 121 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 LINC00869P0C866 280 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 HLA-DRB4P13762 266 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 GALR1P47211 349 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 VAMP2P63027 116 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 TEPPQ6URK8 271 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 Q8NAQ8 132 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 RSG1Q9BU20 258 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 SCRT1Q9BWW7 348 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 SLC25A39Q9BZJ4 359 aaPredicted RBP9.37□□□□□ -0.91
HDAC1-209ENST00000484305 C11orf1Q9H5F2 150 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 MGAT4CQ9UBM8 478 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 HLA-DRB4X5D2U9 266 aa9.37□□□□□ -0.91
HDAC1-209ENST00000484305 NUPR2A6NF83 97 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 H3BRN7 92 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 ISLRO14498 428 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 DEDDO75618 318 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 JTBO76095 146 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 PLP1P60201 277 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 NANOS2P60321 138 aaKnown RBP9.36□□□□□ -0.91
HDAC1-209ENST00000484305 NUTF2P61970 127 aaKnown RBP9.36□□□□□ -0.91
HDAC1-209ENST00000484305 SELENOTP62341 195 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 SLC38A11Q08AI6 406 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 IL15RAQ13261 267 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 CEMP1Q6PRD7 247 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-209ENST00000484305 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 ENKURQ8TC29 256 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 SAV1Q9H4B6 383 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-209ENST00000484305 XCL2Q9UBD3 114 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 HIGD1AQ9Y241 93 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 X6R8D5 127 aa9.36□□□□□ -0.91
HDAC1-209ENST00000484305 PLECQ15149 4684 aaKnown RBP9.35□□□□□ -0.91
HDAC1-209ENST00000484305 IGHV4-28A0A0C4DH34 117 aa9.35□□□□□ -0.91
HDAC1-209ENST00000484305 FAM24AA6NFZ4 105 aa9.35□□□□□ -0.91
HDAC1-209ENST00000484305 ZNF705EA8MWA4 302 aaPredicted RBP9.35□□□□□ -0.91
HDAC1-209ENST00000484305 F6UB75 175 aa9.35□□□□□ -0.91
HDAC1-209ENST00000484305 HYPMO75409 117 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms