RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RD3LP0DJH9 198 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 C4BPBP20851 252 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 ADMP35318 185 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 CAMLGP49069 296 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 CYP2G1PQ6ZSU1 146 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 PPP1R14BQ96C90 147 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 NARS2Q96I59 477 aaKnown RBP10.93□□□□□ -0.66
USP11-207ENST00000478596 ARPC5LQ9BPX5 153 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 RETNQ9HD89 108 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 PEMTQ9UBM1 199 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 WDR83OSQ9Y284 106 aa10.93□□□□□ -0.66
USP11-207ENST00000478596 NDUFA4O00483 81 aa10.92□□□□□ -0.66
USP11-207ENST00000478596 AGPAT2O15120 278 aa10.92□□□□□ -0.66
USP11-207ENST00000478596 ZNF207O43670 478 aaKnown RBP10.92□□□□□ -0.66
USP11-207ENST00000478596 MPDU1O75352 247 aa10.92□□□□□ -0.66
USP11-207ENST00000478596 IGKV1-17P01599 117 aa10.92□□□□□ -0.66
USP11-207ENST00000478596 YPEL3P61236 119 aaPredicted RBP10.92□□□□□ -0.66
USP11-207ENST00000478596 SELENOTP62341 195 aa10.92□□□□□ -0.66
USP11-207ENST00000478596 ZNF90Q03938 601 aa10.92□□□□□ -0.66
USP11-207ENST00000478596 VWC2Q2TAL6 325 aa10.92□□□□□ -0.66
USP11-207ENST00000478596 HSD17B11Q8NBQ5 300 aa10.92□□□□□ -0.66
USP11-207ENST00000478596 OR51G1Q8NGK1 321 aa10.92□□□□□ -0.66
USP11-207ENST00000478596 ZNF471Q9BX82 626 aaPredicted RBP10.92□□□□□ -0.66
USP11-207ENST00000478596 UFC1Q9Y3C8 167 aa10.92□□□□□ -0.66
USP11-207ENST00000478596 TAAR5O14804 337 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 BCL2L11O43521 198 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 LINC00869P0C866 280 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 NKX2-5P52952 324 aaPredicted RBP10.91□□□□□ -0.66
USP11-207ENST00000478596 KCNRGQ8N5I3 272 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 OR1B1Q8NGR6 318 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 DYNLRB2Q8TF09 96 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 TMEM190Q8WZ59 177 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 DLX4Q92988 240 aaPredicted RBP10.91□□□□□ -0.66
USP11-207ENST00000478596 METTL26Q96S19 204 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 MGST2Q99735 147 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 FAM110AQ9BQ89 295 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 ELOVL1Q9BW60 279 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 GGTLC1Q9BX51 225 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 NPCDR1Q9BY65 106 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 KRTAP4-5Q9BYR2 181 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 WDR61Q9GZS3 305 aaKnown RBP10.91□□□□□ -0.66
USP11-207ENST00000478596 DOK5Q9P104 306 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 HERC1Q15751 4861 aa10.91□□□□□ -0.66
USP11-207ENST00000478596 IGKV1D-37A0A075B6S9 117 aa10.9□□□□□ -0.66
USP11-207ENST00000478596 IGKV1OR2-108A0A075B7D4 117 aa10.9□□□□□ -0.66
USP11-207ENST00000478596 COX7A2P2O60397 106 aa10.9□□□□□ -0.66
USP11-207ENST00000478596 HNRNPCP07910 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
USP11-207ENST00000478596 PSG1P11464 419 aa10.9□□□□□ -0.66
USP11-207ENST00000478596 CXCL2P19875 107 aa10.9□□□□□ -0.66
USP11-207ENST00000478596 BMI1P35226 326 aa10.9□□□□□ -0.66
USP11-207ENST00000478596 ELLP55199 621 aaPredicted RBP10.9□□□□□ -0.66
USP11-207ENST00000478596 RPL7L1Q6DKI1 246 aaKnown RBP10.9□□□□□ -0.66
USP11-207ENST00000478596 TMUB2Q71RG4 321 aa10.9□□□□□ -0.66
USP11-207ENST00000478596 RNF125Q96EQ8 232 aa10.9□□□□□ -0.66
USP11-207ENST00000478596 RSG1Q9BU20 258 aa10.9□□□□□ -0.66
USP11-207ENST00000478596 DAZ1Q9NQZ3 744 aaKnown RBP10.9□□□□□ -0.66
USP11-207ENST00000478596 NUPR2A6NF83 97 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 BOLA2-SMG1P6H3BVE0 249 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 CFDP00746 253 aaPredicted RBP10.89□□□□□ -0.67
USP11-207ENST00000478596 OR5G3P0C626 314 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 ORM2P19652 201 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 GATA2P23769 480 aaPredicted RBP10.89□□□□□ -0.67
USP11-207ENST00000478596 S100A7P31151 101 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 B2MP61769 119 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 EIF5AP63241 154 aaKnown RBP10.89□□□□□ -0.67
USP11-207ENST00000478596 MIC13Q5XKP0 118 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 TOMM20LQ6UXN7 152 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 UNQ9165/PRO28630Q6UXU0 137 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 Q6ZRG5 221 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 S100A7AQ86SG5 101 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 GPHB5Q86YW7 130 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 STPG3Q8N7X2 389 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 OR9G4Q8NGQ1 327 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 WFDC1Q9HC57 220 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 PFDN2Q9UHV9 154 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 RABAC1Q9UI14 185 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 PXMP4Q9Y6I8 212 aa10.89□□□□□ -0.67
USP11-207ENST00000478596 IGHV3-49A0A0A0MS15 119 aa10.88□□□□□ -0.67
USP11-207ENST00000478596 KLF5Q13887 457 aaPredicted RBP10.88□□□□□ -0.67
USP11-207ENST00000478596 OPCMLQ14982 345 aa10.88□□□□□ -0.67
USP11-207ENST00000478596 FFAR4Q5NUL3 377 aa10.88□□□□□ -0.67
USP11-207ENST00000478596 MUC4Q99102 2169 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 A8MWP6 167 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 LGALS9O00182 355 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 IGLV1-51P01701 117 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 NPPCP23582 126 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 C9orf62Q8N4C0 152 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 GRAMD2BQ96HH9 432 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 PARD6GQ9BYG4 376 aaPredicted RBP10.87□□□□□ -0.67
USP11-207ENST00000478596 TMEM231Q9H6L2 316 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 TUBA4BQ9H853 241 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 SLC39A9Q9NUM3 307 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 HIGD1AQ9Y241 93 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 FAT2Q9NYQ8 4349 aa10.87□□□□□ -0.67
USP11-207ENST00000478596 DNAH11Q96DT5 4516 aa10.86□□□□□ -0.67
USP11-207ENST00000478596 DYNC1H1Q14204 4646 aaKnown RBP10.86□□□□□ -0.67
USP11-207ENST00000478596 IGHV3OR16-13A0A075B7E8 117 aa10.86□□□□□ -0.67
USP11-207ENST00000478596 IGHV3-74A0A0B4J1X5 117 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms