RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 IGHV3-66A0A0C4DH42 116 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 C5orf51A6NDU8 294 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 CFDP00746 253 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-208ENST00000476739 GPX4P36969 197 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-208ENST00000476739 ATP5IP56385 69 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-208ENST00000476739 RAB11AP62491 216 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 EIF5AP63241 154 aaKnown RBP7.27□□□□□ -1.25
HDAC3-208ENST00000476739 IL15RAQ13261 267 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 C10orf91Q5T1B1 145 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 TMUB2Q71RG4 321 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 OR1S2Q8NGQ3 325 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 SMIM8Q96KF7 97 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 B9D2Q9BPU9 175 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 RHPN1-AS1Q9BWJ2 59 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 IGKV1OR2-108A0A075B7D4 117 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 C5orf52A6NGY3 159 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 SIX6O95475 246 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 FRMD6-AS1P0C7T7 363 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 IGHV4-30-4P0DP06 118 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 YPEL3P61236 119 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-208ENST00000476739 ZNF90Q03938 601 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 USF2Q15853 346 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-208ENST00000476739 TMEM14EPQ6UXP3 125 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 RBPMS2Q6ZRY4 209 aaKnown RBP7.26□□□□□ -1.25
HDAC3-208ENST00000476739 THAP6Q8TBB0 222 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 C2orf50Q96LR7 162 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 C11orf1Q9H5F2 150 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 TUBA4BQ9H853 241 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 SMCO4Q9NRQ5 59 aa7.26□□□□□ -1.25
HDAC3-208ENST00000476739 STRAPQ9Y3F4 350 aaKnown RBP7.26□□□□□ -1.25
HDAC3-208ENST00000476739 LSM5Q9Y4Y9 91 aaKnown RBP7.26□□□□□ -1.25
HDAC3-208ENST00000476739 IGKV3-7A0A075B6H7 116 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 K7EPK0 472 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 GOSR2O14653 212 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 TOMM40O96008 361 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 METTL15P1P0C7V9 234 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 PSG1P11464 419 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 RPP30P78346 268 aaKnown RBP7.25□□□□□ -1.25
HDAC3-208ENST00000476739 ARL16Q0P5N6 197 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 FAM90A2PQ658T7 463 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 OR8G2PQ6IF36 304 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 TMEM182Q6ZP80 229 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-208ENST00000476739 ACOT7LQ6ZUV0 252 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 GTSCR1Q86UQ5 136 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 SBSPONQ8IVN8 264 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 DEFB125Q8N687 156 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 Q8WTZ3 238 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 SLC35E1Q96K37 410 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 PFDN5Q99471 154 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 GINS3Q9BRX5 216 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 SEC11CQ9BY50 192 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 VSIRQ9H7M9 311 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 C19orf73Q9NVV2 129 aa7.25□□□□□ -1.25
HDAC3-208ENST00000476739 TRAV25A0A0B4J276 109 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 FAM74A7A6NL05 159 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 ZFP92A6NM28 416 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 DFFBO76075 338 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 IL4P05112 153 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 RD3LP0DJH9 198 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 CRYBB3P26998 211 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 OR2F1Q13607 317 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 RAB32Q13637 225 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 PEA15Q15121 130 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 FAM74A3Q4VXF1 159 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 GBGT1Q8N5D6 347 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 THAP8Q8NA92 274 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 OR51G1Q8NGK1 321 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 METTL26Q96S19 204 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 RAB40CQ96S21 281 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 C2orf88Q9BSF0 95 aa7.24□□□□□ -1.25
HDAC3-208ENST00000476739 TGP01266 2768 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 FAM24AA6NFZ4 105 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 A8MZ25 164 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 OR11H12B2RN74 326 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 SCGB2A1O75556 95 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 MT-ND4LP03901 98 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 CXCL3P19876 107 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 NPPCP23582 126 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 GATA2P23769 480 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-208ENST00000476739 TFPI2P48307 235 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 H2BFSP57053 126 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 TAS2R30P59541 319 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 S100A10P60903 97 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 ZNF345Q14585 488 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 TCF24Q7RTU0 167 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 STPG3Q8N7X2 389 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 BPIFCQ8NFQ6 507 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 RAB24Q969Q5 203 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 TRGV9Q99603 122 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 SPAG8Q99932 426 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-208ENST00000476739 ARL6Q9H0F7 186 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 MGAT4CQ9UBM8 478 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 U3KQE9 123 aa7.23□□□□□ -1.25
HDAC3-208ENST00000476739 HUWE1Q7Z6Z7 4374 aaKnown RBP7.23□□□□□ -1.25
HDAC3-208ENST00000476739 KANTRA0A1W2PQU2 76 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 SMCO3A2RU48 225 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 RBMY1BA6NDE4 496 aaKnown RBP7.22□□□□□ -1.25
HDAC3-208ENST00000476739 RBMY1EA6NEQ0 496 aaKnown RBP7.22□□□□□ -1.25
HDAC3-208ENST00000476739 RBMY1DP0C7P1 496 aaKnown RBP7.22□□□□□ -1.25
HDAC3-208ENST00000476739 SPP1P10451 314 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms