RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 ZNF785A8K8V0 405 aa7.79□□□□□ -1.16
CASC3-204ENST00000474190 MRPS12O15235 138 aaKnown RBP7.79□□□□□ -1.16
CASC3-204ENST00000474190 NKX2-5P52952 324 aaPredicted RBP7.79□□□□□ -1.16
CASC3-204ENST00000474190 CD300EQ496F6 205 aaPredicted RBP7.79□□□□□ -1.16
CASC3-204ENST00000474190 GLMPQ8WWB7 406 aa7.79□□□□□ -1.16
CASC3-204ENST00000474190 RNF2Q99496 336 aa7.79□□□□□ -1.16
CASC3-204ENST00000474190 RHPN1-AS1Q9BWJ2 59 aa7.79□□□□□ -1.16
CASC3-204ENST00000474190 SH3BGRL3Q9H299 93 aa7.79□□□□□ -1.16
CASC3-204ENST00000474190 SMAD5-AS1Q9Y6J3 95 aa7.79□□□□□ -1.16
CASC3-204ENST00000474190 H3BRN7 92 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 MPDU1O75352 247 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 SAP30O75446 220 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 DFFBO76075 338 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 LYZP61626 148 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 SELENOTP62341 195 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 SPATA31B1PQ5VZV4 182 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 C16orf54Q6UWD8 224 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 TMUB2Q71RG4 321 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 TMEM61Q8N0U2 210 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 INO80EQ8NBZ0 244 aaPredicted RBP7.78□□□□□ -1.16
CASC3-204ENST00000474190 MARC2Q969Z3 335 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 UHRF2Q96PU4 802 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 ELOVL1Q9BW60 279 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 SLC39A9Q9NUM3 307 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 DOK5Q9P104 306 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 PEMTQ9UBM1 199 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 PXMP4Q9Y6I8 212 aa7.78□□□□□ -1.16
CASC3-204ENST00000474190 HNRNPCP07910 306 aaKnown RBP eCLIP7.77□□□□□ -1.17
CASC3-204ENST00000474190 ORM2P19652 201 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 NPPCP23582 126 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 ATP6V0CP27449 155 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 INSL3P51460 131 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 B2MP61769 119 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 C9orf66Q5T8R8 295 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 LEMD1Q68G75 181 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 FAM167A-AS1Q96KT0 104 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 HYLS1Q96M11 299 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 GINS3Q9BRX5 216 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 SHANK2-AS3Q9BTD1 123 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 PBDC1Q9BVG4 233 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 SCRT1Q9BWW7 348 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 SLC25A39Q9BZJ4 359 aaPredicted RBP7.77□□□□□ -1.17
CASC3-204ENST00000474190 C19orf73Q9NVV2 129 aa7.77□□□□□ -1.17
CASC3-204ENST00000474190 TECRQ9NZ01 308 aaKnown RBP7.77□□□□□ -1.17
CASC3-204ENST00000474190 ZNF256Q9Y2P7 627 aaPredicted RBP7.77□□□□□ -1.17
CASC3-204ENST00000474190 HUWE1Q7Z6Z7 4374 aaKnown RBP7.76□□□□□ -1.17
CASC3-204ENST00000474190 TRAV5A0A0B4J249 113 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 A0A0D9SG52 128 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 ZNF98A6NK75 572 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 BCL2L11O43521 198 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 EIF3GO75821 320 aaKnown RBP eCLIP7.76□□□□□ -1.17
CASC3-204ENST00000474190 CFDP00746 253 aaPredicted RBP7.76□□□□□ -1.17
CASC3-204ENST00000474190 OR5G3P0C626 314 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 HSD17B11Q8NBQ5 300 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 OR1B1Q8NGR6 318 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 OR2G3Q8NGZ4 309 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 ZNF503Q96F45 646 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 METTL26Q96S19 204 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 MCRIP2Q9BUT9 160 aaKnown RBP7.76□□□□□ -1.17
CASC3-204ENST00000474190 ARL6Q9H0F7 186 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 SEPSECSQ9HD40 501 aaKnown RBP7.76□□□□□ -1.17
CASC3-204ENST00000474190 TIMM9Q9Y5J7 89 aa7.76□□□□□ -1.17
CASC3-204ENST00000474190 BOLA2-SMG1P6H3BVE0 249 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 SOCS3O14543 225 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 TAAR5O14804 337 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 TSPAN4O14817 238 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 HYPMO75409 117 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 IFNA5P01569 189 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 FABP1P07148 127 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 SPP1P10451 314 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 ZNF266Q14584 549 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 ZFP69Q49AA0 526 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 SSX7Q7RTT5 188 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 Q8N1Y9 231 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 RPP25LQ8N5L8 163 aaKnown RBP7.75□□□□□ -1.17
CASC3-204ENST00000474190 FAM24BQ8N5W8 94 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 STOML3Q8TAV4 291 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 DCANP1Q8TF63 244 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 ARPC5LQ9BPX5 153 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 PSMG3Q9BT73 122 aaPredicted RBP7.75□□□□□ -1.17
CASC3-204ENST00000474190 SLC25A32Q9H2D1 315 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 DNAJC4Q9NNZ3 241 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 RABAC1Q9UI14 185 aa7.75□□□□□ -1.17
CASC3-204ENST00000474190 SCGB2A1O75556 95 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 JTBO76095 146 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 NUP62P37198 522 aaPredicted RBP7.74□□□□□ -1.17
CASC3-204ENST00000474190 RAB2AP61019 212 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 ZNF726P1Q15940 193 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 C1orf194Q5T5A4 169 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 PXDC1Q5TGL8 231 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 MIR17HGQ75NE6 70 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 TCF24Q7RTU0 167 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 LINC00305Q7Z4B0 112 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 OR2K2Q8NGT1 345 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 SLC25A2Q9BXI2 301 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 HIGD1AQ9Y241 93 aa7.74□□□□□ -1.17
CASC3-204ENST00000474190 SORL1Q92673 2214 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 ELOA3CA0A087WX78 387 aaPredicted RBP7.73□□□□□ -1.17
CASC3-204ENST00000474190 TRAV8-2A0A0B4J237 113 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 TRAV25A0A0B4J276 109 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms