RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 U3KQE9 123 aa9.31□□□□□ -0.92
DDX56-209ENST00000473924 OR11H12B2RN74 326 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 BUB3O43684 328 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 OR5G3P0C626 314 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 IGHV4-30-4P0DP06 118 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 FGF7P21781 194 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 AP2S1P53680 142 aaPredicted RBP9.3□□□□□ -0.92
DDX56-209ENST00000473924 CLINT1Q14677 625 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 VWC2Q2TAL6 325 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 S100A7AQ86SG5 101 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 STXBP6Q8NFX7 210 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 MGST2Q99735 147 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 MS4A6AQ9H2W1 248 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 TUBA4BQ9H853 241 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 SLC45A2Q9UMX9 530 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 WDR83OSQ9Y284 106 aa9.3□□□□□ -0.92
DDX56-209ENST00000473924 HYPMO75409 117 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 LYL1P12980 280 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 SIGLEC15Q6ZMC9 328 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 DEFB125Q8N687 156 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 OR2T35Q8NGX2 323 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 GLMPQ8WWB7 406 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 ARL6Q9H0F7 186 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 SLC25A22Q9H936 323 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 FBXL17Q9UF56 701 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 UBQLN2Q9UHD9 624 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 HIGD1AQ9Y241 93 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 HSPB11Q9Y547 144 aa9.29□□□□□ -0.92
DDX56-209ENST00000473924 MPDU1O75352 247 aa9.28□□□□□ -0.92
DDX56-209ENST00000473924 FRMD6-AS1P0C7T7 363 aa9.28□□□□□ -0.92
DDX56-209ENST00000473924 CMC4P56277 68 aaPredicted RBP9.28□□□□□ -0.92
DDX56-209ENST00000473924 C1orf194Q5T5A4 169 aa9.28□□□□□ -0.92
DDX56-209ENST00000473924 PXDC1Q5TGL8 231 aa9.28□□□□□ -0.92
DDX56-209ENST00000473924 Q6ZRG5 221 aa9.28□□□□□ -0.92
DDX56-209ENST00000473924 OR8I2Q8N0Y5 310 aa9.28□□□□□ -0.92
DDX56-209ENST00000473924 ATP5SQ99766 215 aa9.28□□□□□ -0.92
DDX56-209ENST00000473924 GGTLC1Q9BX51 225 aa9.28□□□□□ -0.92
DDX56-209ENST00000473924 SMIM3Q9BZL3 60 aa9.28□□□□□ -0.92
DDX56-209ENST00000473924 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
DDX56-209ENST00000473924 TRAV2A0A0B4J234 112 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 ZNF98A6NK75 572 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 COX7A2P2O60397 106 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 PLP1P60201 277 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 Q5BKY6 102 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 MIC13Q5XKP0 118 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 STPG3Q8N7X2 389 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 ZNF709Q8N972 641 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 B9D2Q9BPU9 175 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 SLC25A39Q9BZJ4 359 aaPredicted RBP9.27□□□□□ -0.93
DDX56-209ENST00000473924 ARV1Q9H2C2 271 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 SRD5A3Q9H8P0 318 aa9.27□□□□□ -0.93
DDX56-209ENST00000473924 FXYD6-FXYD2A0A087WZ82 144 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 A8MZ25 164 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 IFNA5P01569 189 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 RPL29P47914 159 aaKnown RBP9.26□□□□□ -0.93
DDX56-209ENST00000473924 B2MP61769 119 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 OPCMLQ14982 345 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 INO80EQ8NBZ0 244 aaPredicted RBP9.26□□□□□ -0.93
DDX56-209ENST00000473924 SCGB1C1Q8TD33 95 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 GPR82Q96P67 336 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 UHRF2Q96PU4 802 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 SCRT1Q9BWW7 348 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 NPCDR1Q9BY65 106 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 WDR61Q9GZS3 305 aaKnown RBP9.26□□□□□ -0.93
DDX56-209ENST00000473924 NRN1Q9NPD7 142 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 C19orf73Q9NVV2 129 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 RNF24Q9Y225 148 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 PXMP4Q9Y6I8 212 aa9.26□□□□□ -0.93
DDX56-209ENST00000473924 ELOA3CA0A087WX78 387 aaPredicted RBP9.25□□□□□ -0.93
DDX56-209ENST00000473924 C17orf112F2Z3M2 114 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 H3BRN7 92 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 K7EQG2 157 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 GALR1P47211 349 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 PRR20EP86478 221 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 PRR20CP86479 221 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 PRR20DP86480 221 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 PRR20BP86481 221 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 PRR20AP86496 221 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 ODF3L2Q3SX64 289 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 C10orf113Q5VZT2 155 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 LEMD1Q68G75 181 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 PATE2Q6UY27 113 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 LINC00305Q7Z4B0 112 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 OR1L4Q8NGR5 311 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 DCANP1Q8TF63 244 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 CHAC2Q8WUX2 184 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 AQP10Q96PS8 301 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 PFDN5Q99471 154 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 ASCL2Q99929 193 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 FAM110AQ9BQ89 295 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 SHANK2-AS3Q9BTD1 123 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 SLC25A32Q9H2D1 315 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 MAP6D1Q9H9H5 199 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 KCNIP2Q9NS61 270 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 SLC39A9Q9NUM3 307 aa9.25□□□□□ -0.93
DDX56-209ENST00000473924 DNAH3Q8TD57 4116 aa9.24□□□□□ -0.93
DDX56-209ENST00000473924 DEFB131AP59861 70 aa9.24□□□□□ -0.93
DDX56-209ENST00000473924 SNRPD3P62318 126 aaKnown RBP9.24□□□□□ -0.93
DDX56-209ENST00000473924 APRG1Q8IVJ8 170 aa9.24□□□□□ -0.93
DDX56-209ENST00000473924 FAM24BQ8N5W8 94 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms