RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 SCAND1P57086 179 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 EFNB1P98172 346 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 LCE2CQ5TA81 110 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 SFXN4Q6P4A7 337 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 RPL22L1Q6P5R6 122 aaKnown RBP4.05□□□□□ -1.76
HDAC3-206ENST00000471968 TCTE3Q8IZS6 198 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 DMBX1Q8NFW5 382 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 OR52I1Q8NGK6 324 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 OR5H6Q8NGV6 325 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 OR10J5Q8NHC4 309 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 LRRC20Q8TCA0 184 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 TCTEX1D2Q8WW35 142 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 LSM10Q969L4 123 aaKnown RBP4.05□□□□□ -1.76
HDAC3-206ENST00000471968 TMEM230Q96A57 120 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 ZC2HC1AQ96GY0 325 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 ST6GAL2Q96JF0 529 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 SLC35E1Q96K37 410 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 C8orf49Q96NF6 230 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 CCDC90BQ9GZT6 254 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 PRO0255Q9UI72 69 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 NSG2Q9Y328 171 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 TPRKBQ9Y3C4 175 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 U3KQE9 123 aa4.05□□□□□ -1.76
HDAC3-206ENST00000471968 TRBV6-6A0A0A6YYG2 114 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 TRAV8-3A0A0A6YYJ7 113 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 TEX50A0A1B0GTY4 177 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 A8MTW9 85 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 UPK2O00526 184 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 CTDSP2O14595 271 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 CBX5P45973 191 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 PSMB3P49720 205 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 CNN1P51911 297 aaKnown RBP4.04□□□□□ -1.76
HDAC3-206ENST00000471968 S100A12P80511 92 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 ST3GAL4Q11206 333 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 SRSF9Q13242 221 aaKnown RBP eCLIP4.04□□□□□ -1.76
HDAC3-206ENST00000471968 TOR2AQ5JU69 321 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 SPANXN2Q5MJ10 180 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 AHSA2Q719I0 299 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 SNX29P2Q8IUI4 249 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 JAGN1Q8N5M9 183 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 OR1P1Q8NH06 330 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 ORAI1Q96D31 301 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 CENPOQ9BU64 300 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 MND1Q9BWT6 205 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 AK3Q9UIJ7 227 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 DIMT1Q9UNQ2 313 aaKnown RBP4.04□□□□□ -1.76
HDAC3-206ENST00000471968 HHLA3Q9XRX5 114 aa4.04□□□□□ -1.76
HDAC3-206ENST00000471968 LINC00862A6NCI5 91 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 TRDCB7Z8K6 153 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 PTGES3LE9PB15 166 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 TMEM50AO95807 157 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 HSMCR30P0CW71 290 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 CD37P11049 281 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 CD36P16671 472 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 WNT4P56705 351 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 BRWD1-AS2P59051 145 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 CNBPP62633 177 aaKnown RBP4.03□□□□□ -1.76
HDAC3-206ENST00000471968 LINC00469Q8N7U9 141 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 OR4A4PQ8NGN8 299 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 OR1L8Q8NGR8 309 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 PCNPQ8WW12 178 aaKnown RBP4.03□□□□□ -1.76
HDAC3-206ENST00000471968 GPR146Q96CH1 333 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 SMIM19Q96E16 107 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 KRTAP4-1Q9BYQ7 146 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 SLC25A39Q9BZJ4 359 aaPredicted RBP4.03□□□□□ -1.76
HDAC3-206ENST00000471968 DCSTAMPQ9H295 470 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 DUSP21Q9H596 190 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 FGF20Q9NP95 211 aaPredicted RBP4.03□□□□□ -1.76
HDAC3-206ENST00000471968 NDUFA4L2Q9NRX3 87 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 PLEKHJ1Q9NW61 149 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 SPATA2Q9UM82 520 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 FUT9Q9Y231 359 aa4.03□□□□□ -1.76
HDAC3-206ENST00000471968 A0A075B6Q4 140 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 TRAV8-1A0A0A6YYK1 113 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 FABP7O15540 132 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 RGS10O43665 173 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 CLN5O75503 358 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 PSMB9P28065 219 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 HLA-DMAP28067 261 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 VBP1P61758 197 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 NCS1P62166 190 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 CIRBPQ14011 172 aaKnown RBP4.02□□□□□ -1.77
HDAC3-206ENST00000471968 Q499Y3 187 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 OR10J3Q5JRS4 329 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 SDIM1Q6ZPB5 146 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 CCDC190Q86UF4 302 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 Q8N3U1 123 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 CCDC71LQ8N9Z2 235 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 UFD1Q92890 307 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 C20orf173Q96LM9 149 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 GINS4Q9BRT9 223 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 RPRMQ9NS64 109 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 MRPS18AQ9NVS2 196 aaKnown RBP4.02□□□□□ -1.77
HDAC3-206ENST00000471968 COX11Q9Y6N1 276 aa4.02□□□□□ -1.77
HDAC3-206ENST00000471968 IGKV2D-24A0A075B6R9 120 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 IGKV1OR2-108A0A075B7D4 117 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 TRGV1A0A0A0MS02 117 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 TRBV6-7A0A0A0MS04 114 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 TRAV8-6A0A0B4J262 113 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 E9PI62 339 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms