RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 TMEM144Q7Z5S9 345 aa11.51□□□□□ -0.57
HDAC6-218ENST00000470942 OR8I2Q8N0Y5 310 aa11.51□□□□□ -0.57
HDAC6-218ENST00000470942 RARRES2Q99969 163 aa11.51□□□□□ -0.57
HDAC6-218ENST00000470942 LSM5Q9Y4Y9 91 aaKnown RBP11.51□□□□□ -0.57
HDAC6-218ENST00000470942 DYNC2H1Q8NCM8 4307 aaKnown RBP11.51□□□□□ -0.57
HDAC6-218ENST00000470942 TSC22D2O75157 780 aa11.5□□□□□ -0.57
HDAC6-218ENST00000470942 UPK1BO75841 260 aa11.5□□□□□ -0.57
HDAC6-218ENST00000470942 TMEM182Q6ZP80 229 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-218ENST00000470942 TRPT1Q86TN4 253 aaKnown RBP11.5□□□□□ -0.57
HDAC6-218ENST00000470942 OR10P1Q8NGE3 313 aa11.5□□□□□ -0.57
HDAC6-218ENST00000470942 OR1B1Q8NGR6 318 aa11.5□□□□□ -0.57
HDAC6-218ENST00000470942 OR11H2Q8NH07 326 aa11.5□□□□□ -0.57
HDAC6-218ENST00000470942 ENKURQ8TC29 256 aa11.5□□□□□ -0.57
HDAC6-218ENST00000470942 SEPSECSQ9HD40 501 aaKnown RBP11.5□□□□□ -0.57
HDAC6-218ENST00000470942 MGAT4CQ9UBM8 478 aa11.5□□□□□ -0.57
HDAC6-218ENST00000470942 RYR3Q15413 4870 aa11.5□□□□□ -0.57
HDAC6-218ENST00000470942 C7orf66A4D0T2 115 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 IL5P05113 134 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 ID1P41134 155 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 BCAP31P51572 246 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 DLK1P80370 383 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 PMS2P11Q13670 270 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 MORN3Q6PF18 240 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-218ENST00000470942 CYP2G1PQ6ZSU1 146 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 C2orf50Q96LR7 162 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 LINC00052Q96N35 136 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 TMEM147Q9BVK8 224 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 SLC25A22Q9H936 323 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 NPVFQ9HCQ7 196 aa11.49□□□□□ -0.57
HDAC6-218ENST00000470942 LYSTQ99698 3801 aa11.48□□□□□ -0.57
HDAC6-218ENST00000470942 CXorf65A6NEN9 183 aa11.48□□□□□ -0.57
HDAC6-218ENST00000470942 K7EPK0 472 aa11.48□□□□□ -0.57
HDAC6-218ENST00000470942 SPP1P10451 314 aa11.48□□□□□ -0.57
HDAC6-218ENST00000470942 S100A7P31151 101 aa11.48□□□□□ -0.57
HDAC6-218ENST00000470942 EWSR1Q01844 656 aaKnown RBP eCLIP11.48□□□□□ -0.57
HDAC6-218ENST00000470942 GSG1LQ6UXU4 331 aa11.48□□□□□ -0.57
HDAC6-218ENST00000470942 TMEM217Q8N7C4 229 aa11.48□□□□□ -0.57
HDAC6-218ENST00000470942 DOK5Q9P104 306 aa11.48□□□□□ -0.57
HDAC6-218ENST00000470942 SLC45A2Q9UMX9 530 aa11.48□□□□□ -0.57
HDAC6-218ENST00000470942 ZNF98A6NK75 572 aa11.47□□□□□ -0.57
HDAC6-218ENST00000470942 GALR1P47211 349 aa11.47□□□□□ -0.57
HDAC6-218ENST00000470942 SLC25A32Q9H2D1 315 aa11.47□□□□□ -0.57
HDAC6-218ENST00000470942 BATF3Q9NR55 127 aa11.47□□□□□ -0.57
HDAC6-218ENST00000470942 LCE6AA0A183 80 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 FNDC10F2Z333 226 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 PVALBP20472 110 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-218ENST00000470942 C4BPBP20851 252 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 CAV2P51636 162 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 S100A10P60903 97 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 RAP2BP61225 183 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 SELENOTP62341 195 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 IFITM3Q01628 133 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 ARL16Q0P5N6 197 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 TMEM41BQ5BJD5 291 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 TEPPQ6URK8 271 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 RSG1Q9BU20 258 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 GPN1Q9HCN4 374 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-218ENST00000470942 HIGD1AQ9Y241 93 aa11.46□□□□□ -0.57
HDAC6-218ENST00000470942 H3BMM0 161 aa11.45□□□□□ -0.58
HDAC6-218ENST00000470942 HYPMO75409 117 aa11.45□□□□□ -0.58
HDAC6-218ENST00000470942 DEDDO75618 318 aa11.45□□□□□ -0.58
HDAC6-218ENST00000470942 GIG44P09565 113 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-218ENST00000470942 OR5G3P0C626 314 aa11.45□□□□□ -0.58
HDAC6-218ENST00000470942 LINC00869P0C866 280 aa11.45□□□□□ -0.58
HDAC6-218ENST00000470942 PSMB3P49720 205 aa11.45□□□□□ -0.58
HDAC6-218ENST00000470942 C16orf92Q96LL3 132 aa11.45□□□□□ -0.58
HDAC6-218ENST00000470942 CLEC5AQ9NY25 188 aa11.45□□□□□ -0.58
HDAC6-218ENST00000470942 FAM24AA6NFZ4 105 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 SOCS3O14543 225 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 DEFB4AO15263 64 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 ATF4P18848 351 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-218ENST00000470942 MEOX2P50222 304 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 DEFB1P60022 68 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 NUTF2P61970 127 aaKnown RBP11.44□□□□□ -0.58
HDAC6-218ENST00000470942 SLC38A11Q08AI6 406 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 NRARPQ7Z6K4 114 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 GPR82Q96P67 336 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 GGACTQ9BVM4 153 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 SCRT1Q9BWW7 348 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 SLC25A39Q9BZJ4 359 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-218ENST00000470942 ARL6Q9H0F7 186 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
HDAC6-218ENST00000470942 INMT-MINDY4F8WBC2 141 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 H3BRN7 92 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 ISLRO14498 428 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 GOSR2O14653 212 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 JTBO76095 146 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 CST7O76096 145 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 IGKV3-20P01619 116 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 PLP1P60201 277 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 FGL1Q08830 312 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 RAB32Q13637 225 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 GDF5OSQ5U4N7 250 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 SAMD13Q5VXD3 122 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 S100A7AQ86SG5 101 aa11.43□□□□□ -0.58
HDAC6-218ENST00000470942 AGPAT2O15120 278 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 SIX6O95475 246 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 DEFA1P59665 94 aa11.42□□□□□ -0.58
HDAC6-218ENST00000470942 DEFA3P59666 94 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms