RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 SMCO3A2RU48 225 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 LINC00862A6NCI5 91 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 MPDU1O75352 247 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 CCNKO75909 580 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 NHLRC4P0CG21 123 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-208ENST00000469123 PSG1P11464 419 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 ATF4P18848 351 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-208ENST00000469123 H2BFSP57053 126 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 CD81P60033 236 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 FGL1Q08830 312 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 SLC38A11Q08AI6 406 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 ZNF546Q86UE3 836 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 HAPLN4Q86UW8 402 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 TMEM252Q8N6L7 170 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 PPP1R1CQ8WVI7 109 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 ZNF414Q96IQ9 312 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 C11orf1Q9H5F2 150 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 SEPSECSQ9HD40 501 aaKnown RBP6.44□□□□□ -1.38
SSBP1-208ENST00000469123 FBXL17Q9UF56 701 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 ALG5Q9Y673 324 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 U3KQE9 123 aa6.44□□□□□ -1.38
SSBP1-208ENST00000469123 IGHV3OR16-8A0A075B7F1 116 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 IZUMO1RA6ND01 250 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 PCP4L1A6NKN8 68 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 ZNF207O43670 478 aaKnown RBP6.43□□□□□ -1.38
SSBP1-208ENST00000469123 DFFBO76075 338 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 MEOX2P50222 304 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 PLP1P60201 277 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 VWC2Q2TAL6 325 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 MAJINQ3KP22 176 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 FAM90A2PQ658T7 463 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 CYP2G1PQ6ZSU1 146 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 LRRC20Q8TCA0 184 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 ST8SIA2Q92186 375 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 WDR89Q96FK6 387 aaPredicted RBP6.43□□□□□ -1.38
SSBP1-208ENST00000469123 GPR82Q96P67 336 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 RNF2Q99496 336 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 TMEM147Q9BVK8 224 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 TUBA4BQ9H853 241 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 UQCC1Q9NVA1 299 aa6.43□□□□□ -1.38
SSBP1-208ENST00000469123 IGKV1OR2-108A0A075B7D4 117 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 FAM24AA6NFZ4 105 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 DNASE2O00115 360 aaPredicted RBP6.42□□□□□ -1.38
SSBP1-208ENST00000469123 BUB3O43684 328 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 SIX6O95475 246 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 MPC2O95563 127 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 S100A8P05109 93 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 GIPP09681 153 aaPredicted RBP6.42□□□□□ -1.38
SSBP1-208ENST00000469123 SMIM6P0DI80 62 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 IGHV4-30-4P0DP06 118 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 NKX2-5P52952 324 aaPredicted RBP6.42□□□□□ -1.38
SSBP1-208ENST00000469123 LYZP61626 148 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 RRAS2P62070 204 aaPredicted RBP6.42□□□□□ -1.38
SSBP1-208ENST00000469123 ZNF90Q03938 601 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 USF2Q15853 346 aaPredicted RBP6.42□□□□□ -1.38
SSBP1-208ENST00000469123 TCF24Q7RTU0 167 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 Q8N1Y9 231 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 THAP6Q8TBB0 222 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 C12orf57Q99622 126 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 KCNIP2Q9NS61 270 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 C19orf73Q9NVV2 129 aa6.42□□□□□ -1.38
SSBP1-208ENST00000469123 ELOA3CA0A087WX78 387 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-208ENST00000469123 OR11H12B2RN74 326 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 HYPMO75409 117 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 CST7O76096 145 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 LINC00869P0C866 280 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 EDN2P20800 178 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 RAP2BP61225 183 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 RPL11P62913 178 aaKnown RBP6.41□□□□□ -1.38
SSBP1-208ENST00000469123 LRRC37A5PQ49AS3 106 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 SIGLEC15Q6ZMC9 328 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 TMEM217Q8N7C4 229 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 STPG3Q8N7X2 389 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 GLMPQ8WWB7 406 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 PBDC1Q9BVG4 233 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 MS4A6AQ9H2W1 248 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 OR51M1Q9H341 326 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 WDR83OSQ9Y284 106 aa6.41□□□□□ -1.38
SSBP1-208ENST00000469123 IGHV3-49A0A0A0MS15 119 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 IGSF23A1L1A6 192 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 AGPAT2O15120 278 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 CD7P09564 240 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 H2AFB1P0C5Y9 115 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 FRMD6-AS1P0C7T7 363 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 LYL1P12980 280 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 GALR1P47211 349 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 CAMLGP49069 296 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 SNRPD3P62318 126 aaKnown RBP6.4□□□□□ -1.38
SSBP1-208ENST00000469123 EWSR1Q01844 656 aaKnown RBP eCLIP6.4□□□□□ -1.38
SSBP1-208ENST00000469123 ARL16Q0P5N6 197 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 OR2F1Q13607 317 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 Q6ZRG5 221 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 OR8I2Q8N0Y5 310 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 OR1B1Q8NGR6 318 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 PFDN5Q99471 154 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 NEU1Q99519 415 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 TCEAL7Q9BRU2 100 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 ZMAT4Q9H898 229 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 NRN1Q9NPD7 142 aa6.4□□□□□ -1.38
SSBP1-208ENST00000469123 HIGD1AQ9Y241 93 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms