RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 IGHMP01871 453 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 LGALS1P09382 135 aaKnown RBP2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 TFPTP0C1Z6 253 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 ZNF705DP0CH99 300 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 SMIM17P0DL12 118 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 GPX2P18283 190 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 GZMHP20718 246 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 OPRK1P41145 380 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 RPS28P62857 69 aaKnown RBP2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 SELENOWP63302 87 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 BAMBIQ13145 260 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 LAIR2Q6ISS4 152 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 SLC48A1Q6P1K1 146 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 EBLN2Q6P2I7 272 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 DAZ4Q86SG3 579 aaKnown RBP2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 SNX29P2Q8IUI4 249 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 BAP18Q8IXM2 172 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 ORMDL3Q8N138 153 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 LINC00337Q8N6G1 96 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 SLC25A29Q8N8R3 303 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 ZDHHC22Q8N966 263 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 TMEM75Q8N9X5 138 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 ZNF555Q8NEP9 628 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 LINC01560Q8TB33 94 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR5P3Q8WZ94 311 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 TMEM203Q969S6 136 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 ISOC1Q96CN7 298 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 DERL3Q96Q80 235 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 DOHHQ9BU89 302 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 PLA2G12AQ9BZM1 189 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 CHST6Q9GZX3 395 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 DAZ1Q9NQZ3 744 aaKnown RBP2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 ZNF443Q9Y2A4 671 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 U3KQA8 63 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 WDFY3Q8IZQ1 3526 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 DMXL1Q9Y485 3027 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 TRAV9-1A0A075B6T8 112 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 LOC100130705A0A1B0GUX0 176 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 SPAARA0A1B0GVQ0 90 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 A8MWL6 223 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 TMEM250H0YL14 139 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 J3QR89 54 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 ISLRO14498 428 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 CYB5BO43169 146 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 APOMO95445 188 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 IGLV3-19P01714 112 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 CLPSP04118 112 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 GYPBP06028 91 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 HTR1AP08908 422 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 SEC11BP0C7V7 166 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 RPS27P42677 84 aaKnown RBP2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 SERPINB10P48595 397 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 CMC4P56277 68 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 RUNX1Q01196 453 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 ZNF616Q08AN1 781 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 BTN1A1Q13410 526 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 PLPPR5Q32ZL2 321 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 MRPL2Q5T653 305 aaKnown RBP2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 ZFP2Q6ZN57 461 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 IDO2Q6ZQW0 420 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 WDR86Q86TI4 376 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 MARCH3Q86UD3 253 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 C8orf59Q8N0T1 100 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 OSR2Q8N2R0 312 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR8A1Q8NGG7 326 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR8D4Q8NGM9 314 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 SLC25A40Q8TBP6 338 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 CIRBP-AS1Q8TBR5 109 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 REEP6Q96HR9 211 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 SDF2Q99470 211 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 TCEAL7Q9BRU2 100 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 CHCHD7Q9BUK0 85 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 IMUPQ9GZP8 106 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 CA10Q9NS85 328 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 HSPB8Q9UJY1 196 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 ANAPC10Q9UM13 185 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 PRR14LQ5THK1 2151 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 AKAP13Q12802 2813 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 ATRXP46100 2492 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 CHD3Q12873 2000 aaKnown RBP2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 ZGRF1Q86YA3 2104 aa2.44□□□□□ -2.02
HMGB1P25-201ENST00000468402 TRBV20OR9-2A0A075B6H5 130 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 IGHV3-15A0A0B4J1V0 119 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 DUXBA0A1W2PPF3 345 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 TLCD2A6NGC4 264 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 FAM25AB3EWG3 89 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 FAM25CB3EWG5 89 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 FAM25GB3EWG6 89 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 ATP6V1G2-DDX39BF2Z307 99 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 J3KT08 172 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 K7EP13 123 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 M0R2Z0 102 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 CDC42EP2O14613 210 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 C1QBP02746 253 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 MDKP21741 143 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 NPY1RP25929 384 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
HMGB1P25-201ENST00000468402 S100A7P31151 101 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms