RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 C1orf194Q5T5A4 169 aa14.87□□□□□ -0.03
COL9A3-204ENST00000463487 FAM90A2PQ658T7 463 aa14.87□□□□□ -0.03
COL9A3-204ENST00000463487 KCNIP2Q9NS61 270 aa14.87□□□□□ -0.03
COL9A3-204ENST00000463487 HSPB11Q9Y547 144 aa14.87□□□□□ -0.03
COL9A3-204ENST00000463487 IGKV3-7A0A075B6H7 116 aa14.86□□□□□ -0.03
COL9A3-204ENST00000463487 BUB3O43684 328 aa14.86□□□□□ -0.03
COL9A3-204ENST00000463487 HYPMO75409 117 aa14.86□□□□□ -0.03
COL9A3-204ENST00000463487 FGF7P21781 194 aa14.86□□□□□ -0.03
COL9A3-204ENST00000463487 GATA2P23769 480 aaPredicted RBP14.86□□□□□ -0.03
COL9A3-204ENST00000463487 CLINT1Q14677 625 aa14.86□□□□□ -0.03
COL9A3-204ENST00000463487 C16orf54Q6UWD8 224 aa14.86□□□□□ -0.03
COL9A3-204ENST00000463487 Q6ZRG5 221 aa14.86□□□□□ -0.03
COL9A3-204ENST00000463487 OR2T35Q8NGX2 323 aa14.86□□□□□ -0.03
COL9A3-204ENST00000463487 MGST2Q99735 147 aa14.86□□□□□ -0.03
COL9A3-204ENST00000463487 ATP5SQ99766 215 aa14.86□□□□□ -0.03
COL9A3-204ENST00000463487 TRAV2A0A0B4J234 112 aa14.85□□□□□ -0.03
COL9A3-204ENST00000463487 OR5G3P0C626 314 aa14.85□□□□□ -0.03
COL9A3-204ENST00000463487 PLP1P60201 277 aa14.85□□□□□ -0.03
COL9A3-204ENST00000463487 SIGLEC15Q6ZMC9 328 aa14.85□□□□□ -0.03
COL9A3-204ENST00000463487 ZNF709Q8N972 641 aa14.85□□□□□ -0.03
COL9A3-204ENST00000463487 INO80EQ8NBZ0 244 aaPredicted RBP14.85□□□□□ -0.03
COL9A3-204ENST00000463487 GLMPQ8WWB7 406 aa14.85□□□□□ -0.03
COL9A3-204ENST00000463487 ARL6Q9H0F7 186 aa14.85□□□□□ -0.03
COL9A3-204ENST00000463487 TUBA4BQ9H853 241 aa14.85□□□□□ -0.03
COL9A3-204ENST00000463487 HIGD1AQ9Y241 93 aa14.85□□□□□ -0.03
COL9A3-204ENST00000463487 MEGF8Q7Z7M0 2845 aa14.84□□□□□ -0.03
COL9A3-204ENST00000463487 IFNA5P01569 189 aa14.84□□□□□ -0.03
COL9A3-204ENST00000463487 CD7P09564 240 aa14.84□□□□□ -0.03
COL9A3-204ENST00000463487 TFPI2P48307 235 aa14.84□□□□□ -0.03
COL9A3-204ENST00000463487 OR8I2Q8N0Y5 310 aa14.84□□□□□ -0.03
COL9A3-204ENST00000463487 Q8N1Y9 231 aa14.84□□□□□ -0.03
COL9A3-204ENST00000463487 STXBP6Q8NFX7 210 aa14.84□□□□□ -0.03
COL9A3-204ENST00000463487 GPR82Q96P67 336 aa14.84□□□□□ -0.03
COL9A3-204ENST00000463487 MS4A6AQ9H2W1 248 aa14.84□□□□□ -0.03
COL9A3-204ENST00000463487 DOK5Q9P104 306 aa14.84□□□□□ -0.03
COL9A3-204ENST00000463487 ELOA3CA0A087WX78 387 aaPredicted RBP14.83□□□□□ -0.04
COL9A3-204ENST00000463487 OR11H12B2RN74 326 aa14.83□□□□□ -0.04
COL9A3-204ENST00000463487 C17orf112F2Z3M2 114 aa14.83□□□□□ -0.04
COL9A3-204ENST00000463487 COX7A2P2O60397 106 aa14.83□□□□□ -0.04
COL9A3-204ENST00000463487 RPL29P47914 159 aaKnown RBP14.83□□□□□ -0.04
COL9A3-204ENST00000463487 TMEM182Q6ZP80 229 aaPredicted RBP14.83□□□□□ -0.04
COL9A3-204ENST00000463487 GBGT1Q8N5D6 347 aa14.83□□□□□ -0.04
COL9A3-204ENST00000463487 SCGB1C1Q8TD33 95 aa14.83□□□□□ -0.04
COL9A3-204ENST00000463487 CHAC2Q8WUX2 184 aa14.83□□□□□ -0.04
COL9A3-204ENST00000463487 FAM110AQ9BQ89 295 aa14.83□□□□□ -0.04
COL9A3-204ENST00000463487 GGTLC1Q9BX51 225 aa14.83□□□□□ -0.04
COL9A3-204ENST00000463487 FXYD6-FXYD2A0A087WZ82 144 aa14.82□□□□□ -0.04
COL9A3-204ENST00000463487 IGHV4-30-4P0DP06 118 aa14.82□□□□□ -0.04
COL9A3-204ENST00000463487 SAMD13Q5VXD3 122 aa14.82□□□□□ -0.04
COL9A3-204ENST00000463487 STPG3Q8N7X2 389 aa14.82□□□□□ -0.04
COL9A3-204ENST00000463487 OR1L4Q8NGR5 311 aa14.82□□□□□ -0.04
COL9A3-204ENST00000463487 AQP10Q96PS8 301 aa14.82□□□□□ -0.04
COL9A3-204ENST00000463487 PFDN5Q99471 154 aa14.82□□□□□ -0.04
COL9A3-204ENST00000463487 NPCDR1Q9BY65 106 aa14.82□□□□□ -0.04
COL9A3-204ENST00000463487 A8MZ25 164 aa14.81□□□□□ -0.04
COL9A3-204ENST00000463487 GALR1P47211 349 aa14.81□□□□□ -0.04
COL9A3-204ENST00000463487 B2MP61769 119 aa14.81□□□□□ -0.04
COL9A3-204ENST00000463487 OPCMLQ14982 345 aa14.81□□□□□ -0.04
COL9A3-204ENST00000463487 WFDC3Q8IUB2 231 aa14.81□□□□□ -0.04
COL9A3-204ENST00000463487 SLC25A39Q9BZJ4 359 aaPredicted RBP14.81□□□□□ -0.04
COL9A3-204ENST00000463487 WDR61Q9GZS3 305 aaKnown RBP14.81□□□□□ -0.04
COL9A3-204ENST00000463487 ARV1Q9H2C2 271 aa14.81□□□□□ -0.04
COL9A3-204ENST00000463487 SLC25A22Q9H936 323 aa14.81□□□□□ -0.04
COL9A3-204ENST00000463487 NRN1Q9NPD7 142 aa14.81□□□□□ -0.04
COL9A3-204ENST00000463487 ZNF98A6NK75 572 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 PRR20EP86478 221 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 PRR20CP86479 221 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 PRR20DP86480 221 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 PRR20BP86481 221 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 PRR20AP86496 221 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 ZNF266Q14584 549 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 C10orf113Q5VZT2 155 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 B9D2Q9BPU9 175 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 SHANK2-AS3Q9BTD1 123 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 SMIM3Q9BZL3 60 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 SLC39A9Q9NUM3 307 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 PXMP4Q9Y6I8 212 aa14.8□□□□□ -0.04
COL9A3-204ENST00000463487 H3BRN7 92 aa14.79□□□□□ -0.04
COL9A3-204ENST00000463487 RPL7P18124 248 aaKnown RBP14.79□□□□□ -0.04
COL9A3-204ENST00000463487 MEOX2P50222 304 aa14.79□□□□□ -0.04
COL9A3-204ENST00000463487 MIC13Q5XKP0 118 aa14.79□□□□□ -0.04
COL9A3-204ENST00000463487 DNAH3Q8TD57 4116 aa14.79□□□□□ -0.04
COL9A3-204ENST00000463487 SRD5A3Q9H8P0 318 aa14.79□□□□□ -0.04
COL9A3-204ENST00000463487 DNAJC4Q9NNZ3 241 aa14.79□□□□□ -0.04
COL9A3-204ENST00000463487 SNRPD3P62318 126 aaKnown RBP14.78□□□□□ -0.04
COL9A3-204ENST00000463487 Q6ZNX1 250 aa14.78□□□□□ -0.04
COL9A3-204ENST00000463487 LINC00305Q7Z4B0 112 aa14.78□□□□□ -0.04
COL9A3-204ENST00000463487 DEFB125Q8N687 156 aa14.78□□□□□ -0.04
COL9A3-204ENST00000463487 PARD6GQ9BYG4 376 aaPredicted RBP14.78□□□□□ -0.04
COL9A3-204ENST00000463487 UBQLN2Q9UHD9 624 aa14.78□□□□□ -0.04
COL9A3-204ENST00000463487 K7EQG2 157 aa14.77□□□□□ -0.05
COL9A3-204ENST00000463487 FRMD6-AS1P0C7T7 363 aa14.77□□□□□ -0.05
COL9A3-204ENST00000463487 Q5BKY6 102 aa14.77□□□□□ -0.05
COL9A3-204ENST00000463487 GATAD1Q8WUU5 269 aa14.77□□□□□ -0.05
COL9A3-204ENST00000463487 UHRF2Q96PU4 802 aa14.77□□□□□ -0.05
COL9A3-204ENST00000463487 SCRT1Q9BWW7 348 aa14.77□□□□□ -0.05
COL9A3-204ENST00000463487 SEPSECSQ9HD40 501 aaKnown RBP14.77□□□□□ -0.05
COL9A3-204ENST00000463487 TNFSF18Q9UNG2 199 aa14.77□□□□□ -0.05
COL9A3-204ENST00000463487 ATF4P18848 351 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-204ENST00000463487 ID1P41134 155 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms