RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 GNB1P62873 340 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 IZUMO4Q1ZYL8 232 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 RPEL1Q2QD12 228 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 UTF1Q5T230 341 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 FAM53AQ6NSI3 398 aaPredicted RBP6.17□□□□□ -1.42
USP4-207ENST00000462673 Q6ZRM9 215 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 Q6ZSV7 163 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 Q6ZWC4 215 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 Q8N2B8 174 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 TMEM256Q8N2U0 113 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 TEX45Q8NA69 505 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 OR5T1Q8NG75 326 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 OR10G8Q8NGN5 311 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 SGMS2Q8NHU3 365 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 LINC01006Q8NI28 216 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 DTD1Q8TEA8 209 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 KCNS1Q96KK3 526 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 RNF2Q99496 336 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 HSPB9Q9BQS6 159 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 MRPL18Q9H0U6 180 aaKnown RBP6.17□□□□□ -1.42
USP4-207ENST00000462673 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.17□□□□□ -1.42
USP4-207ENST00000462673 IL36BQ9NZH7 164 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 UQCR10Q9UDW1 63 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 ZFP30Q9Y2G7 519 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 PAM16Q9Y3D7 125 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 ARL2-SNX15V9GYD0 113 aa6.17□□□□□ -1.42
USP4-207ENST00000462673 A0A1W2PPV4 95 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 C9JCJ5 164 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 RRHO14718 337 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 HMGB3O15347 200 aaKnown RBP6.16□□□□□ -1.42
USP4-207ENST00000462673 FCGR3BO75015 233 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 SERF1AO75920 110 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 CNIH1O95406 144 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 CXorf1O96002 111 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 P0C879 139 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 ATP5G3P48201 142 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 PCP4P48539 62 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 HNRNPA3P51991 378 aaKnown RBP6.16□□□□□ -1.42
USP4-207ENST00000462673 ERVK-16P61578 105 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 BLCAPP62952 87 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 RPP30P78346 268 aaKnown RBP6.16□□□□□ -1.42
USP4-207ENST00000462673 ZNF90Q03938 601 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 Q0VG73 95 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 OR5I1Q13606 314 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 COTL1Q14019 142 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 BATFQ16520 125 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 ZNF585BQ52M93 769 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 TMEM177Q53S58 311 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 OR10J3Q5JRS4 329 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 ZNF562Q6V9R5 426 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 PPP1R27Q86WC6 154 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 BAGE3Q86Y29 109 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 BAGE2Q86Y30 109 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 Q8N6K4 173 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 C5orf56Q8N8D9 126 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 OR1L6Q8NGR2 347 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 OR4A5Q8NH83 315 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 GATAD1Q8WUU5 269 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 C11orf52Q96A22 123 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 HARBI1Q96MB7 349 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 UHRF2Q96PU4 802 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 ZNF747Q9BV97 191 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 SLC45A2Q9UMX9 530 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 WDR83OSQ9Y284 106 aa6.16□□□□□ -1.42
USP4-207ENST00000462673 SETD2Q9BYW2 2564 aaPredicted RBP6.15□□□□□ -1.42
USP4-207ENST00000462673 GRIFINA4D1Z8 144 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 PMS2P5A8MQ11 134 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 PROP1O75360 226 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 NDUFA3O95167 84 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 IGHG2P01859 326 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 HLA-DRB1P01911 266 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 OPRK1P41145 380 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 UBE2G2P60604 165 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 PSG5Q15238 335 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 C5orf64Q2M2E5 130 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 SPATA45Q537H7 98 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 ANKRD39Q53RE8 183 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 KLHDC1Q8N7A1 406 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 Q8N9W7 124 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 OR4X2Q8NGF9 303 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 VN1R17PQ8TDU5 208 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 ORAOV1Q8WV07 137 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 SLC35E1Q96K37 410 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 DNAJC4Q9NNZ3 241 aa6.15□□□□□ -1.42
USP4-207ENST00000462673 AURKAIP1Q9NWT8 199 aaPredicted RBP6.15□□□□□ -1.42
USP4-207ENST00000462673 ZFHX3Q15911 3703 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 SCO2A0A1W2PP80 73 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 C20orf202A1L168 122 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 SNURFLB1AK76 121 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 DIRC3C9JPN6 131 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 NDUFB4O95168 129 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 IGLV2-14P01704 120 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 IGKV1-16P04430 117 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 IGF1P05019 195 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 STAG3L2P0CL84 134 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 STAG3L3P0CL85 134 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 ARL14EPLP0DKL9 152 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 CBLN1P23435 193 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 LINC00310P59036 64 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 SUMO1P63165 101 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms