RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 FAM25EA8MYX2 175 aa16.83■□□□□ 0.28
PTPN4-208ENST00000460289 MBPP02686 304 aaPredicted RBP16.83■□□□□ 0.28
PTPN4-208ENST00000460289 ID1P41134 155 aa16.83■□□□□ 0.28
PTPN4-208ENST00000460289 DLK1P80370 383 aa16.83■□□□□ 0.28
PTPN4-208ENST00000460289 OR11H2Q8NH07 326 aa16.83■□□□□ 0.28
PTPN4-208ENST00000460289 STARD9Q9P2P6 4700 aa16.83■□□□□ 0.28
PTPN4-208ENST00000460289 TENM2Q9NT68 2774 aa16.82■□□□□ 0.28
PTPN4-208ENST00000460289 LCE6AA0A183 80 aa16.82■□□□□ 0.28
PTPN4-208ENST00000460289 FNDC10F2Z333 226 aa16.82■□□□□ 0.28
PTPN4-208ENST00000460289 CCSO14618 274 aa16.82■□□□□ 0.28
PTPN4-208ENST00000460289 METTL15P1P0C7V9 234 aa16.82■□□□□ 0.28
PTPN4-208ENST00000460289 ORM2P19652 201 aa16.82■□□□□ 0.28
PTPN4-208ENST00000460289 NPVFQ9HCQ7 196 aa16.82■□□□□ 0.28
PTPN4-208ENST00000460289 RCL1Q9Y2P8 373 aaKnown RBP16.82■□□□□ 0.28
PTPN4-208ENST00000460289 C7orf66A4D0T2 115 aa16.81■□□□□ 0.28
PTPN4-208ENST00000460289 C5orf51A6NDU8 294 aa16.81■□□□□ 0.28
PTPN4-208ENST00000460289 L7N2F9 121 aa16.81■□□□□ 0.28
PTPN4-208ENST00000460289 IL5P05113 134 aa16.81■□□□□ 0.28
PTPN4-208ENST00000460289 GATA2P23769 480 aaPredicted RBP16.81■□□□□ 0.28
PTPN4-208ENST00000460289 VAMP2P63027 116 aa16.81■□□□□ 0.28
PTPN4-208ENST00000460289 TMEM182Q6ZP80 229 aaPredicted RBP16.81■□□□□ 0.28
PTPN4-208ENST00000460289 TMEM147Q9BVK8 224 aa16.81■□□□□ 0.28
PTPN4-208ENST00000460289 MGAT4CQ9UBM8 478 aa16.81■□□□□ 0.28
PTPN4-208ENST00000460289 UPK1BO75841 260 aa16.8■□□□□ 0.28
PTPN4-208ENST00000460289 NUTF2P61970 127 aaKnown RBP16.8■□□□□ 0.28
PTPN4-208ENST00000460289 RRAS2P62070 204 aaPredicted RBP16.8■□□□□ 0.28
PTPN4-208ENST00000460289 SELENOTP62341 195 aa16.8■□□□□ 0.28
PTPN4-208ENST00000460289 SAMD13Q5VXD3 122 aa16.8■□□□□ 0.28
PTPN4-208ENST00000460289 CYP2G1PQ6ZSU1 146 aa16.8■□□□□ 0.28
PTPN4-208ENST00000460289 C2orf50Q96LR7 162 aa16.8■□□□□ 0.28
PTPN4-208ENST00000460289 CXorf65A6NEN9 183 aa16.79■□□□□ 0.28
PTPN4-208ENST00000460289 ZNF98A6NK75 572 aa16.79■□□□□ 0.28
PTPN4-208ENST00000460289 CCNKO75909 580 aa16.79■□□□□ 0.28
PTPN4-208ENST00000460289 GALR1P47211 349 aa16.79■□□□□ 0.28
PTPN4-208ENST00000460289 PSMB3P49720 205 aa16.79■□□□□ 0.28
PTPN4-208ENST00000460289 EWSR1Q01844 656 aaKnown RBP eCLIP16.79■□□□□ 0.28
PTPN4-208ENST00000460289 OR1B1Q8NGR6 318 aa16.79■□□□□ 0.28
PTPN4-208ENST00000460289 ENKURQ8TC29 256 aa16.79■□□□□ 0.28
PTPN4-208ENST00000460289 GPR82Q96P67 336 aa16.79■□□□□ 0.28
PTPN4-208ENST00000460289 GGACTQ9BVM4 153 aa16.79■□□□□ 0.28
PTPN4-208ENST00000460289 DYNC2H1Q8NCM8 4307 aaKnown RBP16.78■□□□□ 0.28
PTPN4-208ENST00000460289 GIG44P09565 113 aaPredicted RBP16.78■□□□□ 0.28
PTPN4-208ENST00000460289 MEOX2P50222 304 aa16.78■□□□□ 0.28
PTPN4-208ENST00000460289 TEPPQ6URK8 271 aa16.78■□□□□ 0.28
PTPN4-208ENST00000460289 GSG1LQ6UXU4 331 aa16.78■□□□□ 0.28
PTPN4-208ENST00000460289 LINC00052Q96N35 136 aa16.78■□□□□ 0.28
PTPN4-208ENST00000460289 SLC25A22Q9H936 323 aa16.78■□□□□ 0.28
PTPN4-208ENST00000460289 LSM5Q9Y4Y9 91 aaKnown RBP16.78■□□□□ 0.28
PTPN4-208ENST00000460289 H3BMM0 161 aa16.77■□□□□ 0.28
PTPN4-208ENST00000460289 ISLRO14498 428 aa16.77■□□□□ 0.28
PTPN4-208ENST00000460289 JTBO76095 146 aa16.77■□□□□ 0.28
PTPN4-208ENST00000460289 RAP2BP61225 183 aa16.77■□□□□ 0.28
PTPN4-208ENST00000460289 S100A7AQ86SG5 101 aa16.77■□□□□ 0.28
PTPN4-208ENST00000460289 C11orf68Q9H3H3 251 aaKnown RBP16.77■□□□□ 0.28
PTPN4-208ENST00000460289 BATF3Q9NR55 127 aa16.77■□□□□ 0.28
PTPN4-208ENST00000460289 AGRNO00468 2067 aa16.77■□□□□ 0.27
PTPN4-208ENST00000460289 NUPR2A6NF83 97 aa16.76■□□□□ 0.27
PTPN4-208ENST00000460289 K7EPK0 472 aa16.76■□□□□ 0.27
PTPN4-208ENST00000460289 HYPMO75409 117 aa16.76■□□□□ 0.27
PTPN4-208ENST00000460289 DEDDO75618 318 aa16.76■□□□□ 0.27
PTPN4-208ENST00000460289 PVALBP20472 110 aaPredicted RBP16.76■□□□□ 0.27
PTPN4-208ENST00000460289 BCAP31P51572 246 aa16.76■□□□□ 0.27
PTPN4-208ENST00000460289 PLP1P60201 277 aa16.76■□□□□ 0.27
PTPN4-208ENST00000460289 PMS2P11Q13670 270 aa16.76■□□□□ 0.27
PTPN4-208ENST00000460289 C1QTNF4Q9BXJ3 329 aa16.76■□□□□ 0.27
PTPN4-208ENST00000460289 SLC25A32Q9H2D1 315 aa16.76■□□□□ 0.27
PTPN4-208ENST00000460289 GPN1Q9HCN4 374 aaPredicted RBP16.76■□□□□ 0.27
PTPN4-208ENST00000460289 HIGD1AQ9Y241 93 aa16.76■□□□□ 0.27
PTPN4-208ENST00000460289 SOCS3O14543 225 aa16.75■□□□□ 0.27
PTPN4-208ENST00000460289 LINC00869P0C866 280 aa16.75■□□□□ 0.27
PTPN4-208ENST00000460289 HLA-DRB4P13762 266 aa16.75■□□□□ 0.27
PTPN4-208ENST00000460289 C4BPBP20851 252 aa16.75■□□□□ 0.27
PTPN4-208ENST00000460289 RSG1Q9BU20 258 aa16.75■□□□□ 0.27
PTPN4-208ENST00000460289 HLA-DRB4X5D2U9 266 aa16.75■□□□□ 0.27
PTPN4-208ENST00000460289 CAV2P51636 162 aa16.74■□□□□ 0.27
PTPN4-208ENST00000460289 ARL16Q0P5N6 197 aa16.74■□□□□ 0.27
PTPN4-208ENST00000460289 SPATA31B1PQ5VZV4 182 aa16.74■□□□□ 0.27
PTPN4-208ENST00000460289 FOXI2Q6ZQN5 318 aa16.74■□□□□ 0.27
PTPN4-208ENST00000460289 C16orf92Q96LL3 132 aa16.74■□□□□ 0.27
PTPN4-208ENST00000460289 SLC25A39Q9BZJ4 359 aaPredicted RBP16.74■□□□□ 0.27
PTPN4-208ENST00000460289 SAV1Q9H4B6 383 aaPredicted RBP16.74■□□□□ 0.27
PTPN4-208ENST00000460289 DOK5Q9P104 306 aa16.74■□□□□ 0.27
PTPN4-208ENST00000460289 GOSR2O14653 212 aa16.73■□□□□ 0.27
PTPN4-208ENST00000460289 OR5G3P0C626 314 aa16.73■□□□□ 0.27
PTPN4-208ENST00000460289 IFITM3Q01628 133 aa16.73■□□□□ 0.27
PTPN4-208ENST00000460289 PXDC1Q5TGL8 231 aa16.73■□□□□ 0.27
PTPN4-208ENST00000460289 CEMP1Q6PRD7 247 aaPredicted RBP16.73■□□□□ 0.27
PTPN4-208ENST00000460289 SHANK2-AS3Q9BTD1 123 aa16.73■□□□□ 0.27
PTPN4-208ENST00000460289 MFFQ9GZY8 342 aa16.73■□□□□ 0.27
PTPN4-208ENST00000460289 RNF24Q9Y225 148 aa16.73■□□□□ 0.27
PTPN4-208ENST00000460289 H3BRN7 92 aa16.72■□□□□ 0.27
PTPN4-208ENST00000460289 MIFP14174 115 aa16.72■□□□□ 0.27
PTPN4-208ENST00000460289 SLC38A11Q08AI6 406 aa16.72■□□□□ 0.27
PTPN4-208ENST00000460289 IL15RAQ13261 267 aa16.72■□□□□ 0.27
PTPN4-208ENST00000460289 ZNF546Q86UE3 836 aa16.72■□□□□ 0.27
PTPN4-208ENST00000460289 CSNK1G2-AS1Q8NCQ2 148 aa16.72■□□□□ 0.27
PTPN4-208ENST00000460289 C11orf45Q8TAV5 145 aa16.72■□□□□ 0.27
PTPN4-208ENST00000460289 ARL6Q9H0F7 186 aa16.72■□□□□ 0.27
PTPN4-208ENST00000460289 RPRMQ9NS64 109 aa16.72■□□□□ 0.27
PTPN4-208ENST00000460289 CLEC5AQ9NY25 188 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms