RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SOCS3O14543 225 aa13.73□□□□□ -0.21
COL5A1-203ENST00000460264 LYRM1O43325 122 aa13.73□□□□□ -0.21
COL5A1-203ENST00000460264 HLA-DRB4P13762 266 aa13.73□□□□□ -0.21
COL5A1-203ENST00000460264 PSMB3P49720 205 aa13.73□□□□□ -0.21
COL5A1-203ENST00000460264 IAH1Q2TAA2 248 aaPredicted RBP13.73□□□□□ -0.21
COL5A1-203ENST00000460264 OR8I2Q8N0Y5 310 aa13.73□□□□□ -0.21
COL5A1-203ENST00000460264 SMIM8Q96KF7 97 aa13.73□□□□□ -0.21
COL5A1-203ENST00000460264 SLC45A2Q9UMX9 530 aa13.73□□□□□ -0.21
COL5A1-203ENST00000460264 HLA-DRB4X5D2U9 266 aa13.73□□□□□ -0.21
COL5A1-203ENST00000460264 X6R8D5 127 aa13.73□□□□□ -0.21
COL5A1-203ENST00000460264 PMS2P5A8MQ11 134 aa13.72□□□□□ -0.21
COL5A1-203ENST00000460264 RBMY1A1P0DJD3 496 aaKnown RBP13.72□□□□□ -0.21
COL5A1-203ENST00000460264 RBMY1CP0DJD4 496 aa13.72□□□□□ -0.21
COL5A1-203ENST00000460264 MIFP14174 115 aa13.72□□□□□ -0.21
COL5A1-203ENST00000460264 GATA2P23769 480 aaPredicted RBP13.72□□□□□ -0.21
COL5A1-203ENST00000460264 PAX9P55771 341 aa13.72□□□□□ -0.21
COL5A1-203ENST00000460264 RBMY1FQ15415 496 aaKnown RBP13.72□□□□□ -0.21
COL5A1-203ENST00000460264 TMEM182Q6ZP80 229 aaPredicted RBP13.72□□□□□ -0.21
COL5A1-203ENST00000460264 TMEM144Q7Z5S9 345 aa13.72□□□□□ -0.21
COL5A1-203ENST00000460264 BPIFCQ8NFQ6 507 aa13.72□□□□□ -0.21
COL5A1-203ENST00000460264 TBC1D24Q9ULP9 559 aa13.72□□□□□ -0.21
COL5A1-203ENST00000460264 CCNKO75909 580 aa13.71□□□□□ -0.21
COL5A1-203ENST00000460264 LY6G6CO95867 125 aa13.71□□□□□ -0.21
COL5A1-203ENST00000460264 SCGB1D2O95969 90 aa13.71□□□□□ -0.21
COL5A1-203ENST00000460264 ID1P41134 155 aa13.71□□□□□ -0.21
COL5A1-203ENST00000460264 DEFB1P60022 68 aa13.71□□□□□ -0.21
COL5A1-203ENST00000460264 NUTF2P61970 127 aaKnown RBP13.71□□□□□ -0.21
COL5A1-203ENST00000460264 GDF5OSQ5U4N7 250 aa13.71□□□□□ -0.21
COL5A1-203ENST00000460264 ZBTB8BQ8NAP8 495 aaPredicted RBP13.71□□□□□ -0.21
COL5A1-203ENST00000460264 LINC00052Q96N35 136 aa13.71□□□□□ -0.21
COL5A1-203ENST00000460264 C1QTNF4Q9BXJ3 329 aa13.71□□□□□ -0.21
COL5A1-203ENST00000460264 SLC25A32Q9H2D1 315 aa13.71□□□□□ -0.21
COL5A1-203ENST00000460264 RCL1Q9Y2P8 373 aaKnown RBP13.71□□□□□ -0.21
COL5A1-203ENST00000460264 SMCO3A2RU48 225 aa13.7□□□□□ -0.22
COL5A1-203ENST00000460264 ZNF98A6NK75 572 aa13.7□□□□□ -0.22
COL5A1-203ENST00000460264 ISLRO14498 428 aa13.7□□□□□ -0.22
COL5A1-203ENST00000460264 ORM2P19652 201 aa13.7□□□□□ -0.22
COL5A1-203ENST00000460264 TMEM14EPQ6UXP3 125 aa13.7□□□□□ -0.22
COL5A1-203ENST00000460264 GSG1LQ6UXU4 331 aa13.7□□□□□ -0.22
COL5A1-203ENST00000460264 SAV1Q9H4B6 383 aaPredicted RBP13.7□□□□□ -0.22
COL5A1-203ENST00000460264 SLC25A22Q9H936 323 aa13.7□□□□□ -0.22
COL5A1-203ENST00000460264 XCL2Q9UBD3 114 aa13.7□□□□□ -0.22
COL5A1-203ENST00000460264 TRAV6A0A075B6T7 132 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 TCRBP04435 133 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 METTL15P1P0C7V9 234 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 GALR1P47211 349 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 DLK1P80370 383 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 FOXI2Q6ZQN5 318 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 CYP2G1PQ6ZSU1 146 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 OR1B1Q8NGR6 318 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 CCDC32Q9BV29 185 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 TMEM147Q9BVK8 224 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 HRH4Q9H3N8 390 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 NUDT15Q9NV35 164 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 GSKIPQ9P0R6 139 aa13.69□□□□□ -0.22
COL5A1-203ENST00000460264 CCSO14618 274 aa13.68□□□□□ -0.22
COL5A1-203ENST00000460264 TSC22D2O75157 780 aa13.68□□□□□ -0.22
COL5A1-203ENST00000460264 MEOX2P50222 304 aa13.68□□□□□ -0.22
COL5A1-203ENST00000460264 TAS2R30P59541 319 aa13.68□□□□□ -0.22
COL5A1-203ENST00000460264 RRAS2P62070 204 aaPredicted RBP13.68□□□□□ -0.22
COL5A1-203ENST00000460264 C17orf77Q96MU5 243 aa13.68□□□□□ -0.22
COL5A1-203ENST00000460264 ELOA3CA0A087WX78 387 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-203ENST00000460264 FNDC10F2Z333 226 aa13.67□□□□□ -0.22
COL5A1-203ENST00000460264 IGKV3-20P01619 116 aa13.67□□□□□ -0.22
COL5A1-203ENST00000460264 MBPP02686 304 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-203ENST00000460264 IL5P05113 134 aa13.67□□□□□ -0.22
COL5A1-203ENST00000460264 CLUHP3Q96NS8 147 aa13.67□□□□□ -0.22
COL5A1-203ENST00000460264 GPR82Q96P67 336 aa13.67□□□□□ -0.22
COL5A1-203ENST00000460264 SCRT1Q9BWW7 348 aa13.67□□□□□ -0.22
COL5A1-203ENST00000460264 DOK5Q9P104 306 aa13.67□□□□□ -0.22
COL5A1-203ENST00000460264 H3BRN7 92 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 LINC00869P0C866 280 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 S100A7P31151 101 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 SELENOTP62341 195 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 SPATA31B1PQ5VZV4 182 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 ZNF709Q8N972 641 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 OR10P1Q8NGE3 313 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 C16orf92Q96LL3 132 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 C20orf173Q96LM9 149 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 SEC22CQ9BRL7 303 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 RSG1Q9BU20 258 aa13.66□□□□□ -0.22
COL5A1-203ENST00000460264 EPPK1P58107 5090 aaKnown RBP13.65□□□□□ -0.22
COL5A1-203ENST00000460264 C7orf66A4D0T2 115 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 F6UB75 175 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 PLP1P60201 277 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 ZNF846Q147U1 533 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 ZNF705AQ6ZN79 300 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-203ENST00000460264 LINC00299Q6ZSB3 139 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 ZNF431Q8TF32 576 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-203ENST00000460264 C2CD4CQ8TF44 421 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 SHANK2-AS3Q9BTD1 123 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 SLC25A39Q9BZJ4 359 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-203ENST00000460264 RPRMQ9NS64 109 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 MGAT4CQ9UBM8 478 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 HIGD1AQ9Y241 93 aa13.65□□□□□ -0.22
COL5A1-203ENST00000460264 A0A0J9YX75 114 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 K7EPK0 472 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 HYPMO75409 117 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms