RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 MOB4Q9Y3A3 225 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 CD3EP07766 207 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 CTSBP07858 339 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 CRYBA4P53673 196 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 ZNF114Q8NC26 417 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 TMEM158Q8WZ71 300 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 RCHY1Q96PM5 261 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 RNF5Q99942 180 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 SRSF8Q9BRL6 282 aaKnown RBP4.1□□□□□ -1.75
PCDH9-203ENST00000456367 EDA2RQ9HAV5 297 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 COLQQ9Y215 455 aaPredicted RBP4.1□□□□□ -1.75
PCDH9-203ENST00000456367 SCN10AQ9Y5Y9 1956 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 FREM3P0C091 2139 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 WIPF3A6NGB9 483 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 H3BMG7 143 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 K7EMI3 77 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 SAP30O75446 220 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 NPYP01303 97 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 TRACP01848 142 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 IGHG4P01861 327 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 PSG7Q13046 419 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 MRPL14Q6P1L8 145 aaKnown RBP4.1□□□□□ -1.75
PCDH9-203ENST00000456367 LYPD6Q86Y78 171 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 F5P12259 2224 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 BRCA1P38398 1863 aaKnown RBP4.1□□□□□ -1.75
PCDH9-203ENST00000456367 PLXNA3P51805 1871 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 IGLV3-1P01715 115 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 ZNF56Q15929 161 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 PEAR1Q5VY43 1037 aaPredicted RBP4.1□□□□□ -1.75
PCDH9-203ENST00000456367 SEC16AO15027 2179 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 ALPK2Q86TB3 2170 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 TRAV26-1A0A087WT03 109 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 LOC102723996A0A087X1L8 192 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 M0R381 172 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 NPFFO15130 113 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 CNTFRP26992 372 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 SFTA2Q6UW10 78 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 ABHD17AQ96GS6 310 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 RPP25Q9BUL9 199 aaKnown RBP4.1□□□□□ -1.75
PCDH9-203ENST00000456367 MRPL20Q9BYC9 149 aaKnown RBP4.1□□□□□ -1.75
PCDH9-203ENST00000456367 SS18L2Q9UHA2 77 aa4.1□□□□□ -1.75
PCDH9-203ENST00000456367 COL11A2P13942 1736 aaPredicted RBP4.09□□□□□ -1.75
PCDH9-203ENST00000456367 GGTLC3B5MD39 225 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 NUPR1O60356 82 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 CLPSP04118 112 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 NUP37Q8NFH4 326 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 LEAP2Q969E1 77 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 PRO1854Q9UHT4 67 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 URB1O60287 2271 aaKnown RBP4.09□□□□□ -1.75
PCDH9-203ENST00000456367 IGKV1-6A0A0C4DH72 117 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 IGLL5B9A064 214 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 J3KT08 172 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 VCYO14598 125 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 SLC25A20O43772 301 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 IGLV3-19P01714 112 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 CELA3AP09093 270 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 APELAP0DMC3 54 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 SUMO2P61956 95 aaKnown RBP4.09□□□□□ -1.75
PCDH9-203ENST00000456367 PLAURQ03405 335 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 TDRG1Q3Y452 100 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 RNF144BQ7Z419 303 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 TEN1Q86WV5 123 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 ZNF837Q96EG3 531 aaPredicted RBP4.09□□□□□ -1.75
PCDH9-203ENST00000456367 TMEM141Q96I45 108 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 CYYR1Q96J86 154 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 JMJD8Q96S16 334 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 TNFRSF18Q9Y5U5 241 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 THSD7AQ9UPZ6 1657 aa4.09□□□□□ -1.75
PCDH9-203ENST00000456367 C16orf97H3BN30 126 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 ATP5G1P05496 136 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 RNASE2P10153 161 aaKnown RBP4.09□□□□□ -1.76
PCDH9-203ENST00000456367 EVI2AP22794 236 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 ZNF138P52744 262 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 ATP5G2Q06055 141 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 Q6ZSR3 168 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 SPATA12Q7Z6I5 190 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 ZCCHC24Q8N2G6 241 aaKnown RBP4.09□□□□□ -1.76
PCDH9-203ENST00000456367 SMIM20Q8N5G0 67 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 ZNRF1Q8ND25 227 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 RAX2Q96IS3 184 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 DNAJC30Q96LL9 226 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 DPH3P1Q9H4G8 78 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 RPUSD1Q9UJJ7 312 aaKnown RBP4.09□□□□□ -1.76
PCDH9-203ENST00000456367 OVOL1O14753 267 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 UBE2L6O14933 153 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 SH2D1AO60880 128 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 SPAG8Q99932 426 aaPredicted RBP4.09□□□□□ -1.76
PCDH9-203ENST00000456367 TMEM14CQ9P0S9 112 aa4.09□□□□□ -1.76
PCDH9-203ENST00000456367 TRBV7-9A0A0J9YWB2 115 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 F8VRH5 84 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 IGKV1-39P01597 117 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 IGKV1D-39P04432 117 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 ARMS2P0C7Q2 107 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 LMO1P25800 156 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 PRR20EP86478 221 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 PRR20CP86479 221 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 PRR20DP86480 221 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 PRR20BP86481 221 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 PRR20AP86496 221 aa4.08□□□□□ -1.76
PCDH9-203ENST00000456367 COLCA1Q6ZS62 124 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms