RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 INSP01308 110 aa11.83□□□□□ -0.52
UBE2D4-209ENST00000454428 NMSQ5H8A3 153 aa11.83□□□□□ -0.52
UBE2D4-209ENST00000454428 TRAV12-2A0A075B6T6 113 aa11.82□□□□□ -0.52
UBE2D4-209ENST00000454428 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
UBE2D4-209ENST00000454428 SMR3BP02814 79 aaPredicted RBP11.82□□□□□ -0.52
UBE2D4-209ENST00000454428 RPS19P39019 145 aaKnown RBP11.82□□□□□ -0.52
UBE2D4-209ENST00000454428 C16orf92Q96LL3 132 aa11.82□□□□□ -0.52
UBE2D4-209ENST00000454428 CACNG5Q9UF02 275 aa11.82□□□□□ -0.52
UBE2D4-209ENST00000454428 MRPS16Q9Y3D3 137 aaKnown RBP11.82□□□□□ -0.52
UBE2D4-209ENST00000454428 FAT3Q8TDW7 4589 aa11.81□□□□□ -0.52
UBE2D4-209ENST00000454428 CDS2O95674 445 aa11.81□□□□□ -0.52
UBE2D4-209ENST00000454428 LYZP61626 148 aa11.81□□□□□ -0.52
UBE2D4-209ENST00000454428 B2MP61769 119 aa11.81□□□□□ -0.52
UBE2D4-209ENST00000454428 SNX29P2Q8IUI4 249 aa11.81□□□□□ -0.52
UBE2D4-209ENST00000454428 FAM219AQ8IW50 185 aa11.81□□□□□ -0.52
UBE2D4-209ENST00000454428 RNASE11Q8TAA1 199 aaKnown RBP11.81□□□□□ -0.52
UBE2D4-209ENST00000454428 RXFP4Q8TDU9 374 aa11.81□□□□□ -0.52
UBE2D4-209ENST00000454428 ZNF503Q96F45 646 aa11.81□□□□□ -0.52
UBE2D4-209ENST00000454428 CEBPZOSA8MTT3 80 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 HOXA5P20719 270 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 KLF9Q13886 244 aaPredicted RBP11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 GAMTQ14353 236 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 MEF2DQ14814 521 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 IGFL4Q6B9Z1 124 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 CDPF1Q6NVV7 123 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 CROCCP3Q8IVE0 287 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 OR8I2Q8N0Y5 310 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 GLYATL2Q8WU03 294 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 GNPNAT1Q96EK6 184 aaPredicted RBP11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 TMEM222Q9H0R3 208 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 SLC25A32Q9H2D1 315 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 COPZ2Q9P299 210 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 PFDN2Q9UHV9 154 aa11.8□□□□□ -0.52
UBE2D4-209ENST00000454428 TRAV8-2A0A0B4J237 113 aa11.79□□□□□ -0.52
UBE2D4-209ENST00000454428 A0A0J9YY99 117 aa11.79□□□□□ -0.52
UBE2D4-209ENST00000454428 ZNF701M0R085 212 aaPredicted RBP11.79□□□□□ -0.52
UBE2D4-209ENST00000454428 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
UBE2D4-209ENST00000454428 OR5I1Q13606 314 aa11.79□□□□□ -0.52
UBE2D4-209ENST00000454428 SAMD13Q5VXD3 122 aa11.79□□□□□ -0.52
UBE2D4-209ENST00000454428 SELENOHQ8IZQ5 122 aaKnown RBP11.79□□□□□ -0.52
UBE2D4-209ENST00000454428 ARRDC1Q8N5I2 433 aa11.79□□□□□ -0.52
UBE2D4-209ENST00000454428 OR13C8Q8NGS7 320 aa11.79□□□□□ -0.52
UBE2D4-209ENST00000454428 ZFP92A6NM28 416 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 M6PRP20645 277 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 MEOX2P50222 304 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 TAS2R60P59551 318 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 OR2F1Q13607 317 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 GPR141Q7Z602 305 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 RNF182Q8N6D2 247 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 LINC00612Q8N6U2 182 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 OR4D10Q8NGI6 311 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 RNASE8Q8TDE3 154 aaKnown RBP11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 C16orf74Q96GX8 76 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 LINC01587Q99440 93 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 RSG1Q9BU20 258 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 SLC25A39Q9BZJ4 359 aaPredicted RBP11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 NOP10Q9NPE3 64 aaKnown RBP11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 PTTG2Q9NZH5 202 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 RAB26Q9ULW5 256 aa11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 TIMM8BQ9Y5J9 83 aaPredicted RBP11.78□□□□□ -0.52
UBE2D4-209ENST00000454428 DUSP14O95147 198 aaKnown RBP11.77□□□□□ -0.53
UBE2D4-209ENST00000454428 CD3DP04234 171 aa11.77□□□□□ -0.53
UBE2D4-209ENST00000454428 DNAH10OSP0CZ25 163 aa11.77□□□□□ -0.53
UBE2D4-209ENST00000454428 ICAM4Q14773 271 aa11.77□□□□□ -0.53
UBE2D4-209ENST00000454428 RBPMSQ93062 196 aaKnown RBP11.77□□□□□ -0.53
UBE2D4-209ENST00000454428 TNFRSF18Q9Y5U5 241 aa11.77□□□□□ -0.53
UBE2D4-209ENST00000454428 IGKV1OR2-108A0A075B7D4 117 aa11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 BOLA2-SMG1P6H3BVE0 249 aa11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 J3QL48 77 aa11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 B3GALNT1O75752 331 aa11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 HAMPP81172 84 aa11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 RNASE12Q5GAN4 147 aaKnown RBP11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 RNASE10Q5GAN6 216 aaKnown RBP11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 NOXA1Q86UR1 476 aa11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 CCDC71LQ8N9Z2 235 aa11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 MARCH1Q8TCQ1 289 aa11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 PPP1R14BQ96C90 147 aa11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
UBE2D4-209ENST00000454428 TEX13DA0A0J9YY54 714 aaPredicted RBP11.75□□□□□ -0.53
UBE2D4-209ENST00000454428 SNRPGP15A8MWD9 76 aa11.75□□□□□ -0.53
UBE2D4-209ENST00000454428 APOA1P02647 267 aa11.75□□□□□ -0.53
UBE2D4-209ENST00000454428 HTN1P15515 57 aa11.75□□□□□ -0.53
UBE2D4-209ENST00000454428 GALR1P47211 349 aa11.75□□□□□ -0.53
UBE2D4-209ENST00000454428 ERVFC1-1P60608 527 aa11.75□□□□□ -0.53
UBE2D4-209ENST00000454428 TERB2Q8NHR7 220 aa11.75□□□□□ -0.53
UBE2D4-209ENST00000454428 ZFAND1Q8TCF1 268 aa11.75□□□□□ -0.53
UBE2D4-209ENST00000454428 U3KQ87 197 aa11.75□□□□□ -0.53
UBE2D4-209ENST00000454428 ZNF98A6NK75 572 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 H3BNG1 76 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 GPX4P36969 197 aaPredicted RBP11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 NEDD8Q15843 81 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 TMEM268Q5VZI3 342 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 TMEM144Q7Z5S9 345 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 LGI3Q8N145 548 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 TMEM256Q8N2U0 113 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 TRGV9Q99603 122 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 VCX3BQ9H321 246 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 NAA60Q9H7X0 242 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 SLC25A22Q9H936 323 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms