RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 SCRT1Q9BWW7 348 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 RNF223E7ERA6 249 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 DPM2O94777 84 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 S100A7L2Q5SY68 101 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 SLC25A39Q9BZJ4 359 aaPredicted RBP11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 A0A0U1RRA0 63 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 RNF5Q99942 180 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 CABIN1Q9Y6J0 2220 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 TMEM8BA6NDV4 472 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 OSTCQ9NRP0 149 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 IGKV1-27A0A075B6S5 117 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 MST1P26927 711 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 NR2C2APQ86WQ0 139 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 PSPNO60542 156 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 CLPSP04118 112 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 SNHG12Q9BXW3 62 aa11.48□□□□□ -0.57
RAPGEF3-205ENST00000449771 H0YJW9 148 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 LY6HO94772 140 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 PPBPP02775 128 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 C5orf64Q2M2E5 130 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 XIRP1Q702N8 1843 aaKnown RBP11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 FCN3O75636 299 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 GZMBP10144 247 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 Q6ZS92 163 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 DTX1Q86Y01 620 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 GREB1LQ9C091 1923 aaPredicted RBP11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 GAGE1Q13065 139 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 TREML4Q6UXN2 200 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 EXOC3-AS1Q8N2X6 119 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 UBE2E2Q96LR5 201 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 NAA38Q9BRA0 125 aaKnown RBP11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 CHD5Q8TDI0 1954 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 SIPA1L1O43166 1804 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 J3QRE1 110 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 SPINK8P0C7L1 97 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 SVILO95425 2214 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 HSD52Q0P140 79 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 KLF17Q5JT82 389 aaPredicted RBP11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 USMG5Q96IX5 58 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 WFDC1Q9HC57 220 aa11.47□□□□□ -0.57
RAPGEF3-205ENST00000449771 ID3Q02535 119 aa11.46□□□□□ -0.57
RAPGEF3-205ENST00000449771 TPRP12270 2363 aaKnown RBP11.46□□□□□ -0.57
RAPGEF3-205ENST00000449771 LYPD2Q6UXB3 125 aa11.46□□□□□ -0.57
RAPGEF3-205ENST00000449771 LY6G6FQ5SQ64 297 aa11.46□□□□□ -0.57
RAPGEF3-205ENST00000449771 OCC1Q8TAD7 63 aa11.46□□□□□ -0.57
RAPGEF3-205ENST00000449771 WDR83OSQ9Y284 106 aa11.46□□□□□ -0.57
RAPGEF3-205ENST00000449771 SRRM4A7MD48 611 aaKnown RBP11.46□□□□□ -0.58
RAPGEF3-205ENST00000449771 DEFB104AQ8WTQ1 72 aa11.46□□□□□ -0.58
RAPGEF3-205ENST00000449771 RPL36AP83881 106 aaKnown RBP11.46□□□□□ -0.58
RAPGEF3-205ENST00000449771 SPATA31B1PQ5VZV4 182 aa11.46□□□□□ -0.58
RAPGEF3-205ENST00000449771 RPL36ALQ969Q0 106 aaKnown RBP11.46□□□□□ -0.58
RAPGEF3-205ENST00000449771 ZNF479Q96JC4 524 aa11.46□□□□□ -0.58
RAPGEF3-205ENST00000449771 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 IGKCP01834 107 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 TMEM242Q9NWH2 141 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 INSP01308 110 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 TSKUQ8WUA8 353 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 A8MWV9 139 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 PRR30Q53SZ7 412 aaPredicted RBP11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 GFI1Q99684 422 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 TRPM7Q96QT4 1865 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 NAPSAO96009 420 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 RUSC1-AS1Q66K80 236 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 SFTA2Q6UW10 78 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 ABCA7Q8IZY2 2146 aa11.45□□□□□ -0.58
RAPGEF3-205ENST00000449771 IGHG3P01860 377 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 SAA4P35542 130 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 LAGE3Q14657 143 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 ZNF876PQ49A33 203 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 ZNF474Q6S9Z5 364 aaPredicted RBP11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 ATP6V0BQ99437 205 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 TRGV9Q99603 122 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 C1QTNF4Q9BXJ3 329 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 C9orf139Q6ZV77 190 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 DOCK4Q8N1I0 1966 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 HOXA3O43365 443 aaPredicted RBP11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 PLNP26678 52 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 GAS1P54826 345 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 MAPK1IP1LQ8NDC0 245 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 Q96MF0 132 aa11.44□□□□□ -0.58
RAPGEF3-205ENST00000449771 E7EQL1 145 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 K7ENP7 123 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 TET1Q8NFU7 2136 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 GGTLC1Q9BX51 225 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 NYNRINQ9P2P1 1898 aaKnown RBP11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 ZNF138P52744 262 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 CD300EQ496F6 205 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 MORN3Q6PF18 240 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 BMPERQ8N8U9 685 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 MPZP25189 248 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 NPC2P61916 151 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 SEC16AO15027 2179 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 SSBP2P81877 361 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms