RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	PMVK	Q15126	192 aa		5.49	□□□□□ -1.53
TRIM6-205	ENST00000445329	CDSN	Q15517	529 aa		5.49	□□□□□ -1.53
TRIM6-205	ENST00000445329	GDF5OS	Q5U4N7	250 aa		5.49	□□□□□ -1.53
TRIM6-205	ENST00000445329		Q6ZS49	121 aa		5.49	□□□□□ -1.53
TRIM6-205	ENST00000445329	FAM19A1	Q7Z5A9	133 aa		5.49	□□□□□ -1.53
TRIM6-205	ENST00000445329	OR8A1	Q8NGG7	326 aa		5.49	□□□□□ -1.53
TRIM6-205	ENST00000445329	FAM19A4	Q96LR4	140 aa		5.49	□□□□□ -1.53
TRIM6-205	ENST00000445329	ODF3	Q96PU9	254 aa		5.49	□□□□□ -1.53
TRIM6-205	ENST00000445329	SDK1	Q7Z5N4	2213 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	TRAV8-4	A0A0B4J246	113 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	NDUFS4	O43181	175 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	PRKN	O60260	465 aa	Predicted RBP	5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	TRAC	P01848	142 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	SSR4	P51571	173 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	ZNF138	P52744	262 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	TEX36	Q5VZQ5	186 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	ADAMTSL4	Q6UY14	1074 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	WFDC11	Q8NEX6	87 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	HHLA3	Q9XRX5	114 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	CEP192	Q8TEP8	1941 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	HEATR5B	Q9P2D3	2071 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	FAM90A5P	A8MXJ8	464 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	C10orf142	B7Z368	130 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	SRSF10	O75494	262 aa	Known RBP	5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	IL4	P05112	153 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	SCGB1C2	P0DMR2	95 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	TRIP6	Q15654	476 aa	Known RBP	5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	TMEM155	Q4W5P6	130 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	TREML4	Q6UXN2	200 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	TMEFF1	Q8IYR6	380 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	ABHD12	Q8N2K0	398 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	DEFB119	Q8N690	84 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	CNRIP1	Q96F85	164 aa	Predicted RBP	5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	HDHD3	Q9BSH5	251 aa	Predicted RBP	5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	C6orf106	Q9H6K1	298 aa	Predicted RBP	5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	PSENEN	Q9NZ42	101 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	HIGD1B	Q9P298	99 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	TIMM9	Q9Y5J7	89 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	LHFPL6	Q9Y693	200 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	PCSK5	Q92824	1860 aa		5.48	□□□□□ -1.53
TRIM6-205	ENST00000445329	TRGV11	A0A075B6L2	103 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	TRBV5-4	A0A0C4DH59	114 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329		A0A1W2PR77	199 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	hADV29S1	A0JD25	119 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	RPL30	P62888	115 aa	Known RBP	5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	PEAR1	Q5VY43	1037 aa	Predicted RBP	5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	STH	Q8IWL8	128 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	TMEM105	Q8N8V8	129 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	OR11H6	Q8NGC7	330 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	WIPF2	Q8TF74	440 aa	Predicted RBP	5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329		Q96MF0	132 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	TTTY13	Q9BZ97	58 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	PTPRB	P23467	1997 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	IGHV1OR15-9	A0A0B4J2B8	117 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	SMIM27	A0A1W2PRY6	76 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	TMEM178B	H3BS89	294 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	IGLV3-19	P01714	112 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	CD24	P25063	80 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329		Q6ZSR3	168 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	ZNF740	Q8NDX6	193 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	NABP1	Q96AH0	204 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	TP53TG1	Q9Y2A0	90 aa		5.47	□□□□□ -1.53
TRIM6-205	ENST00000445329	TRAV13-1	A0A0B4J241	112 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329		H0Y8X5	98 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	IGHV4-34	P06331	123 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	GCHFR	P30047	84 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	CACNG7	P62955	275 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	RPS21	P63220	83 aa	Known RBP	5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	CENPW	Q5EE01	88 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329		Q6ZR03	302 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	FAM231D	Q6ZW35	169 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	ZNF295-AS1	Q8N0V1	137 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	KNL1	Q8NG31	2342 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	C10orf105	Q8TEF2	133 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	ZNF747	Q9BV97	191 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	OSTC	Q9NRP0	149 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	LINC00527	Q9UJ94	153 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	METRN	Q9UJH8	293 aa		5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.46	□□□□□ -1.53
TRIM6-205	ENST00000445329	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329		A8MZ25	164 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329		C9JCJ5	164 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	TMEM258	P61165	79 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	RPS18	P62269	152 aa	Known RBP	5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	ZNF56	Q15929	161 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	SPANXN5	Q5MJ07	72 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	ZCCHC24	Q8N2G6	241 aa	Known RBP	5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	SLC25A10	Q9UBX3	287 aa	Predicted RBP	5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	TMEM131	Q92545	1883 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	FREM3	P0C091	2139 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	THADA	Q6YHU6	1953 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329		K7ENP7	123 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	ZFP2	Q6ZN57	461 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	PQLC2	Q6ZP29	291 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	MOB3B	Q86TA1	216 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	RPS19BP1	Q86WX3	136 aa	Known RBP	5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	AMN1	Q8IY45	258 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	LINC01561	Q8N1V8	128 aa		5.46	□□□□□ -1.54
TRIM6-205	ENST00000445329	BMF	Q96LC9	184 aa		5.46	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms