RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ATP6V0BQ99437 205 aa12.28□□□□□ -0.44
SNX13-204ENST00000444712 MED13LQ71F56 2210 aa12.28□□□□□ -0.44
SNX13-204ENST00000444712 PGPA6NDG6 321 aa12.28□□□□□ -0.44
SNX13-204ENST00000444712 C5orf52A6NGY3 159 aa12.28□□□□□ -0.44
SNX13-204ENST00000444712 GCGP01275 180 aa12.28□□□□□ -0.44
SNX13-204ENST00000444712 HNF1AP20823 631 aa12.28□□□□□ -0.44
SNX13-204ENST00000444712 UBE2G1P62253 170 aa12.28□□□□□ -0.44
SNX13-204ENST00000444712 OTORQ9NRC9 128 aa12.28□□□□□ -0.44
SNX13-204ENST00000444712 OSTCQ9NRP0 149 aa12.28□□□□□ -0.44
SNX13-204ENST00000444712 A0A096LNT2 108 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 AP4M1O00189 453 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 ERVFC1-1P60608 527 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 RHOGP84095 191 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 RPL19P84098 196 aaKnown RBP12.27□□□□□ -0.44
SNX13-204ENST00000444712 TMEM183BQ1AE95 376 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 C15orf32Q32M92 178 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 TMEM219Q86XT9 240 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 LYPD1Q8N2G4 141 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 ZNF502Q8TBZ5 544 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 ATG101Q9BSB4 218 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 Q9H3A6 140 aa12.27□□□□□ -0.44
SNX13-204ENST00000444712 UBE2CO00762 179 aa12.27□□□□□ -0.45
SNX13-204ENST00000444712 ISLRO14498 428 aa12.27□□□□□ -0.45
SNX13-204ENST00000444712 TRGC2P03986 189 aa12.27□□□□□ -0.45
SNX13-204ENST00000444712 SNRPEP62304 92 aaKnown RBP12.27□□□□□ -0.45
SNX13-204ENST00000444712 LEMD1Q68G75 181 aa12.27□□□□□ -0.45
SNX13-204ENST00000444712 EEF1AKMT3Q96AZ1 226 aa12.27□□□□□ -0.45
SNX13-204ENST00000444712 IL36BQ9NZH7 164 aa12.27□□□□□ -0.45
SNX13-204ENST00000444712 S4R3C0 116 aa12.27□□□□□ -0.45
SNX13-204ENST00000444712 TRBV7-1A0A0A6YYK4 115 aa12.26□□□□□ -0.45
SNX13-204ENST00000444712 TRAV41A0A0B4J266 112 aa12.26□□□□□ -0.45
SNX13-204ENST00000444712 A6NDX4 124 aa12.26□□□□□ -0.45
SNX13-204ENST00000444712 OR2T8A6NH00 312 aa12.26□□□□□ -0.45
SNX13-204ENST00000444712 ZNF98A6NK75 572 aa12.26□□□□□ -0.45
SNX13-204ENST00000444712 DEFB113Q30KQ7 82 aa12.26□□□□□ -0.45
SNX13-204ENST00000444712 FMC1Q96HJ9 113 aa12.26□□□□□ -0.45
SNX13-204ENST00000444712 SPTAN1Q13813 2472 aaKnown RBP12.25□□□□□ -0.45
SNX13-204ENST00000444712 ZNF462Q96JM2 2506 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 FAM223BA6NKX1 122 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 H3BUX3 64 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 BMPR1BO00238 502 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 CTSGP08311 255 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 RPEL1Q2QD12 228 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 FAM223AQ8IWN6 122 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 CHRDL1Q9BU40 450 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 RABAC1Q9UI14 185 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 KLF12Q9Y4X4 402 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 RAB9AP51151 201 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 PDE6HQ13956 83 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 USF2Q15853 346 aaPredicted RBP12.25□□□□□ -0.45
SNX13-204ENST00000444712 BAGE2Q86Y30 109 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 CMTM2Q8TAZ6 248 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 ZNF586Q9NXT0 402 aa12.25□□□□□ -0.45
SNX13-204ENST00000444712 TRBV19A0A075B6N1 114 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 H3BUA1 57 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 BRI3O95415 125 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 IGLV2-8P01709 118 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 AMY1AP04745 511 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 IGF1P05019 195 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 IGLC2P0DOY2 106 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 MGST1P10620 155 aaKnown RBP12.24□□□□□ -0.45
SNX13-204ENST00000444712 C19orf54Q5BKX5 351 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 TACC2O95359 2948 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 FLNCQ14315 2725 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 UBR5O95071 2799 aaPredicted RBP12.24□□□□□ -0.45
SNX13-204ENST00000444712 MYO18BQ8IUG5 2567 aa12.24□□□□□ -0.45
SNX13-204ENST00000444712 G3V318 75 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 IGHV3-23P01764 117 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 TCRAP04437 139 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 RPL7P18124 248 aaKnown RBP12.23□□□□□ -0.45
SNX13-204ENST00000444712 SMUG1Q53HV7 270 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 IBA57Q5T440 356 aaKnown RBP12.23□□□□□ -0.45
SNX13-204ENST00000444712 FAM231DQ6ZW35 169 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 V9GYV3 84 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 ZNF320A2RRD8 509 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST1H2BKO60814 126 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 IGHG2P01859 326 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST1H2BJP06899 126 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST1H2BOP23527 126 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 GPR183P32249 361 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST1H2BBP33778 126 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 AKR1D1P51857 326 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST1H2BDP58876 126 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST1H2BCP62807 126 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 GNG5P63218 68 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 FABP9Q0Z7S8 132 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 OR5I1Q13606 314 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST2H2BEQ16778 126 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 C9orf152Q5JTZ5 239 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST1H2BHQ93079 126 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST1H2BNQ99877 126 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 HIST1H2BMQ99879 126 aa12.23□□□□□ -0.45
SNX13-204ENST00000444712 SH2D7A6NKC9 451 aaPredicted RBP12.22□□□□□ -0.45
SNX13-204ENST00000444712 K7EQM0 130 aa12.22□□□□□ -0.45
SNX13-204ENST00000444712 ATP5G2Q06055 141 aa12.22□□□□□ -0.45
SNX13-204ENST00000444712 GPR82Q96P67 336 aa12.22□□□□□ -0.45
SNX13-204ENST00000444712 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.22□□□□□ -0.457e-9■■■■■ 38.4
SNX13-204ENST00000444712 LINC01548A6NM66 108 aa12.21□□□□□ -0.45
SNX13-204ENST00000444712 MRPS12O15235 138 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms