RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 PGLYRP4Q96LB8 373 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 GAFA1Q96PS6 74 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 WASHC3Q9Y3C0 194 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 MOSP00540 346 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 TNFSF4P23510 183 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 MTURNQ8N3F0 131 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 OR5B3Q8NH48 314 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 RAI1Q7Z5J4 1906 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-218ENST00000442625 TRAV17A0A0B4J275 112 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 ORM2P19652 201 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 TNFAIP6P98066 277 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-218ENST00000442625 FAM120AOSQ5T036 256 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 SSX8Q7RTT4 187 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 MUC15Q8N387 334 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-218ENST00000442625 GRAMD2BQ96HH9 432 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 PIMREGQ9BSJ6 248 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 SAP30LQ9HAJ7 183 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 RNF7Q9UBF6 113 aa11.38□□□□□ -0.59
MCF2L-218ENST00000442625 NUDT3O95989 172 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 RTL8BQ17RB0 113 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 ZCCHC24Q8N2G6 241 aaKnown RBP11.37□□□□□ -0.59
MCF2L-218ENST00000442625 MRPL20Q9BYC9 149 aaKnown RBP11.37□□□□□ -0.59
MCF2L-218ENST00000442625 COMMD5Q9GZQ3 224 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 OR2T8A6NH00 312 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 DEFB109BQ30KR1 87 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 C2orf83Q53S99 150 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 C10orf113Q5VZT2 155 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 PNKDQ8N490 385 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 OR1N2Q8NGR9 330 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 ADTRPQ96IZ2 230 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 IGHV1-69-2A0A0G2JMI3 117 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 OR11H12B2RN74 326 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 SCGB2A1O75556 95 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 IGHV1-46P01743 117 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 SLC25A5P05141 298 aaKnown RBP11.37□□□□□ -0.59
MCF2L-218ENST00000442625 CSN3P07498 182 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 PSG1P11464 419 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 GLRXP35754 106 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 TCTAP57738 103 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 WT1-ASQ06250 92 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 POU2AF1Q16633 256 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 OR11H1Q8NG94 326 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 OR11H2Q8NH07 326 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 TMEM70Q9BUB7 260 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 ZNF257Q9Y2Q1 563 aa11.37□□□□□ -0.59
MCF2L-218ENST00000442625 TPRP12270 2363 aaKnown RBP11.36□□□□□ -0.59
MCF2L-218ENST00000442625 IGHV1-24A0A0C4DH33 117 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 MUC21A0A0G2JKD1 596 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 MUC21A0A140T8X8 626 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 CCL3L1P16619 93 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 ATP5IP56385 69 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-218ENST00000442625 CCL8P80075 99 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 MUC21Q5SSG8 566 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 SLC25A48Q6ZT89 311 aaKnown RBP11.36□□□□□ -0.59
MCF2L-218ENST00000442625 LINC00305Q7Z4B0 112 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 GTSF1Q8WW33 167 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 FXYD5Q96DB9 178 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 EP300Q09472 2414 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-218ENST00000442625 PGPA6NDG6 321 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 M0QXV9 152 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 AZU1P20160 251 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 RHOGP84095 191 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 WIPF2Q8TF74 440 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-218ENST00000442625 C7orf69Q9H7B7 122 aa11.36□□□□□ -0.59
MCF2L-218ENST00000442625 RPUSD1Q9UJJ7 312 aaKnown RBP11.36□□□□□ -0.59
MCF2L-218ENST00000442625 TRAV8-1A0A0A6YYK1 113 aa11.35□□□□□ -0.59
MCF2L-218ENST00000442625 G3V4G9 280 aa11.35□□□□□ -0.59
MCF2L-218ENST00000442625 PRB3Q04118 309 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-218ENST00000442625 KLF5Q13887 457 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-218ENST00000442625 TPSG1Q9NRR2 321 aa11.35□□□□□ -0.59
MCF2L-218ENST00000442625 POLEQ07864 2286 aa11.35□□□□□ -0.59
MCF2L-218ENST00000442625 IGKV1D-37A0A075B6S9 117 aa11.35□□□□□ -0.59
MCF2L-218ENST00000442625 CGB1A6NKQ9 187 aa11.35□□□□□ -0.59
MCF2L-218ENST00000442625 FNDC10F2Z333 226 aa11.35□□□□□ -0.59
MCF2L-218ENST00000442625 HCP5Q6MZN7 132 aa11.35□□□□□ -0.59
MCF2L-218ENST00000442625 OR1B1Q8NGR6 318 aa11.35□□□□□ -0.59
MCF2L-218ENST00000442625 A0A087X0K7 114 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 SPAARA0A1B0GVQ0 90 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 FAM27E3Q08E93 113 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 RITA1Q96K30 269 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 IGLV3-9A0A075B6K5 115 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 TAX1BP3O14907 124 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 TCTEX1D4Q5JR98 221 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 TIMM23BQ5SRD1 257 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 ZNF788Q6ZQV5 615 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 RBMXL3Q8N7X1 1067 aaKnown RBP11.34□□□□□ -0.59
MCF2L-218ENST00000442625 OR1L8Q8NGR8 309 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 RAB9BQ9NP90 201 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 NDUFA4L2Q9NRX3 87 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 PCNX1Q96RV3 2341 aa11.34□□□□□ -0.59
MCF2L-218ENST00000442625 A0A1B0GXF2 115 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 SYS1-DBNDD2H3BUS1 97 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 DLL1O00548 723 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 FSTL3O95633 263 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 SMAGPQ0VAQ4 97 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 AMMECR1LQ6DCA0 310 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 FAM215AQ9Y5M1 114 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 OR2J3O76001 311 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms