RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 FAM216BQ8N7L0 139 aa12.37□□□□□ -0.43
TSC2-206ENST00000439117 ATP6V0BQ99437 205 aa12.37□□□□□ -0.43
TSC2-206ENST00000439117 GBF1Q92538 1859 aa12.37□□□□□ -0.43
TSC2-206ENST00000439117 C9orf118A6NHY6 69 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 CD300EQ496F6 205 aaPredicted RBP12.36□□□□□ -0.43
TSC2-206ENST00000439117 MRPL20Q9BYC9 149 aaKnown RBP12.36□□□□□ -0.43
TSC2-206ENST00000439117 D6R8Y8 96 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 TNFRSF6BO95407 300 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 CDKN1AP38936 164 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 CDKN1BP46527 198 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 TNFRSF14Q92956 283 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 CHAC1Q9BUX1 264 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 DIDO1Q9BTC0 2240 aaKnown RBP12.36□□□□□ -0.43
TSC2-206ENST00000439117 GGTLC3B5MD39 225 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 LY6DQ14210 128 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 MORN2Q502X0 79 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 C2orf82Q6UX34 121 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 DCTN5Q9BTE1 182 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 ZC2HC1BQ5TFG8 222 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 RNF125Q96EQ8 232 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 KLF12Q9Y4X4 402 aa12.36□□□□□ -0.43
TSC2-206ENST00000439117 SEPSECSQ9HD40 501 aaKnown RBP12.35□□□□□ -0.43
TSC2-206ENST00000439117 TSSC4Q9Y5U2 329 aaPredicted RBP12.35□□□□□ -0.43
TSC2-206ENST00000439117 LINC00312Q9Y6C7 94 aa12.35□□□□□ -0.43
TSC2-206ENST00000439117 IGHV3OR16-13A0A075B7E8 117 aa12.35□□□□□ -0.43
TSC2-206ENST00000439117 IGHV3-74A0A0B4J1X5 117 aa12.35□□□□□ -0.43
TSC2-206ENST00000439117 SPANXDQ9BXN6 97 aa12.35□□□□□ -0.43
TSC2-206ENST00000439117 NPFFR1Q9GZQ6 430 aa12.35□□□□□ -0.43
TSC2-206ENST00000439117 SAA2-SAA4A0A096LPE2 208 aa12.35□□□□□ -0.43
TSC2-206ENST00000439117 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.35□□□□□ -0.43
TSC2-206ENST00000439117 IGKV1-5P01602 117 aa12.35□□□□□ -0.43
TSC2-206ENST00000439117 SAA2P0DJI9 122 aaPredicted RBP12.35□□□□□ -0.43
TSC2-206ENST00000439117 CFPP27918 469 aa12.35□□□□□ -0.43
TSC2-206ENST00000439117 IGKV1-12A0A0C4DH73 117 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 IGKV1D-12P01611 117 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 C8orf46Q8TAG6 207 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 FREM3P0C091 2139 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 DPM3Q9P2X0 92 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 YPEL3P61236 119 aaPredicted RBP12.34□□□□□ -0.43
TSC2-206ENST00000439117 QRFPP83859 136 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 FOXF2Q12947 444 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 MDS2Q8NDY4 140 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 F8W1H4 67 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 SPATA31B1PQ5VZV4 182 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 KLHDC3Q9BQ90 382 aa12.34□□□□□ -0.43
TSC2-206ENST00000439117 MLNRO43193 412 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 LILRA1O75019 489 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 EVI2AP22794 236 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 IGKV3OR2-268A0A0C4DH90 116 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 ASCL4Q6XD76 172 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 FGFBP3Q8TAT2 258 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 MYO7BQ6PIF6 2116 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 TCRAP04437 139 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 LGALS1P09382 135 aaKnown RBP12.33□□□□□ -0.44
TSC2-206ENST00000439117 FOXG1P55316 489 aaPredicted RBP12.33□□□□□ -0.44
TSC2-206ENST00000439117 PLEKHB2Q96CS7 222 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 TRAV21A0A0B4J279 112 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 K7EP34 96 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 S100A7L2Q5SY68 101 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 C18orf32Q8TCD1 76 aa12.33□□□□□ -0.44
TSC2-206ENST00000439117 IGHV1-18A0A0C4DH31 117 aa12.32□□□□□ -0.44
TSC2-206ENST00000439117 CRYGSP22914 178 aa12.32□□□□□ -0.44
TSC2-206ENST00000439117 LY6EQ16553 131 aa12.32□□□□□ -0.44
TSC2-206ENST00000439117 ZNF562Q6V9R5 426 aa12.32□□□□□ -0.44
TSC2-206ENST00000439117 Q6ZWC4 215 aa12.32□□□□□ -0.44
TSC2-206ENST00000439117 IL18BPO95998 194 aa12.32□□□□□ -0.44
TSC2-206ENST00000439117 SLC25A39Q9BZJ4 359 aaPredicted RBP12.32□□□□□ -0.44
TSC2-206ENST00000439117 EDA2RQ9HAV5 297 aa12.32□□□□□ -0.44
TSC2-206ENST00000439117 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
TSC2-206ENST00000439117 PPDPFLQ8WWR9 84 aa12.32□□□□□ -0.44
TSC2-206ENST00000439117 TRBV20-1A0A075B6N2 111 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 FAM168AQ92567 244 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 TOMM7Q9P0U1 55 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 IGHV3OR16-12A0A075B7B8 117 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 ETDBQ3ZM63 59 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 MORN3Q6PF18 240 aaPredicted RBP12.31□□□□□ -0.44
TSC2-206ENST00000439117 TEX43Q6ZNM6 134 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 IGHV2-26A0A0B4J1V2 119 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 Q6ZS49 121 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 RTN4RL2Q86UN3 420 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 IGHV3OR16-10A0A075B7F0 116 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 PPP1R27Q86WC6 154 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 NABP1Q96AH0 204 aa12.31□□□□□ -0.44
TSC2-206ENST00000439117 GAGE12HA6NDE8 117 aa12.3□□□□□ -0.44
TSC2-206ENST00000439117 SLAQ13239 276 aa12.3□□□□□ -0.44
TSC2-206ENST00000439117 GFRA4Q9GZZ7 299 aa12.3□□□□□ -0.44
TSC2-206ENST00000439117 TSC2P49815 1807 aa12.3□□□□□ -0.44
TSC2-206ENST00000439117 IGHV3-49A0A0A0MS15 119 aa12.3□□□□□ -0.44
TSC2-206ENST00000439117 LYZL1Q6UWQ5 148 aa12.3□□□□□ -0.44
TSC2-206ENST00000439117 S4R3C0 116 aa12.3□□□□□ -0.44
TSC2-206ENST00000439117 TRBV6-6A0A0A6YYG2 114 aa12.29□□□□□ -0.44
TSC2-206ENST00000439117 A0A1B0GUS0 222 aa12.29□□□□□ -0.44
TSC2-206ENST00000439117 NCR2O95944 276 aa12.29□□□□□ -0.44
TSC2-206ENST00000439117 Q6ZS92 163 aa12.29□□□□□ -0.44
TSC2-206ENST00000439117 STPG4Q8N801 248 aa12.29□□□□□ -0.44
TSC2-206ENST00000439117 SLC25A20O43772 301 aa12.29□□□□□ -0.44
TSC2-206ENST00000439117 TANC1Q9C0D5 1861 aa12.29□□□□□ -0.44
TSC2-206ENST00000439117 PTPRDP23468 1912 aa12.29□□□□□ -0.44
TSC2-206ENST00000439117 C9JAW5 83 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms