RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TRAPPC13A5PLN9 417 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 RBFOX3A6NFN3 312 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 RFPL4AA6NLU0 287 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 LRRN3E7EW58 273 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 RFPL4AL1F8VTS6 287 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 H3BQ85 93 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 C15orf65H3BRN8 121 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 GATCO43716 136 aaKnown RBP1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 C1QBP02746 253 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 C1QCP02747 245 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 DBIP07108 87 aaKnown RBP1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 NEFHP12036 1026 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 MAP2K4P45985 399 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 DLX6P56179 175 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 KRTAP10-4P60372 401 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 HBA1P69905 142 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 TMEM267Q0VDI3 215 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 ENDOGQ14249 297 aaKnown RBP1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 EDDM3AQ14507 147 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 KRTAP25-1Q3LHN0 102 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 LGALSLQ3ZCW2 172 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 LIN52Q52LA3 116 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 TNFAIP8L2Q6P589 184 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 ZCCHC23Q6ZST2 131 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 SCXQ7RTU7 201 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 AMN1Q8IY45 258 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 FAM58AQ8N1B3 248 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 GAPTQ8N292 157 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 UBL4BQ8N7F7 174 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 BLNKQ8WV28 456 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 CDKL2Q92772 493 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 ROPN1LQ96C74 230 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 FMC1Q96HJ9 113 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 ANAPC13Q9BS18 74 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 RTL8AQ9BWD3 113 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 PRRG3Q9BZD7 231 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 CHST5Q9GZS9 411 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 OR51I1Q9H343 314 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 RBM12B-AS1Q9P1G2 102 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 ENPP5Q9UJA9 477 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 TIMM22Q9Y584 194 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 NEBP20929 6669 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 IGKV1D-43A0A0B4J1Z2 117 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 C2orf70A6NJV1 201 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 ZNF729A6NN14 1252 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 F5H5K5 113 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 H3BP45 60 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 K7ERS5 55 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 ZNF593O00488 134 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 HAND1O96004 215 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 SPART-AS1P0CW21 52 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 CGB3P0DN86 165 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 CDK2P24941 298 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 NFYBP25208 207 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 BLVRBP30043 206 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 RANBP1P43487 201 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 EMP1P54849 157 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 NCALDP61601 193 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 AESQ08117 197 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 MMDQ15546 238 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 HIST3H3Q16695 136 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 SMIM21Q3B7S5 101 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 ACOT6Q3I5F7 207 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 FAHD1Q6P587 224 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 UNQ5815/PRO19632Q6UWF5 114 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 SSX7Q7RTT5 188 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 DRAXINQ8NBI3 349 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 CMTM2Q8TAZ6 248 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 HAVCR2Q8TDQ0 301 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 TWIST2Q8WVJ9 160 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 YPEL4Q96NS1 127 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 OR52E6Q96RD3 313 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 LINC01587Q99440 93 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 GABARAPL1Q9H0R8 117 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 CST11Q9H112 138 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 TLNRD1Q9H1K6 362 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 ZNF286AQ9HBT8 521 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 DNAJC27Q9NZQ0 273 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 ATPIF1Q9UII2 106 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 LINC00588Q9Y4M8 146 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 TRAPPC1Q9Y5R8 145 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 TNXBP22105 4242 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 LPAP08519 4548 aa1.5□□□□□ -2.17
HMGB3P12-201ENST00000438745 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 A0A1B0GWA3 101 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 TMEM210A6NLX4 147 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 K7EPK0 472 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 UPK2O00526 184 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 RER1O15258 196 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 PSCAO43653 123 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 SMIM24O75264 130 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 OR5F1O95221 314 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 REG1AP05451 166 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 GUSBP08236 651 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 SCGB1C2P0DMR2 95 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 CTLA4P16410 223 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 HTR2BP41595 481 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 REG1BP48304 166 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 GNG10P50151 68 aa1.49□□□□□ -2.17
HMGB3P12-201ENST00000438745 HOXC5Q00444 222 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms