RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 SLC35E3Q7Z769 313 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 PDZD9Q8IXQ8 264 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 IFT20Q8IY31 132 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 YPEL2Q96QA6 119 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 PKMYT1Q99640 499 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 VPS25Q9BRG1 176 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 PRADC1Q9BSG0 188 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 ADAT1Q9BUB4 502 aaKnown RBP1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 NPCDR1Q9BY65 106 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 EPDR1Q9UM22 224 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 HHLA3Q9XRX5 114 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 CEP164Q9UPV0 1460 aa1.49□□□□□ -2.17
HMGB1P9-201ENST00000429856 RIMBP3CA6NJZ7 1639 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 RIMBP3BA6NNM3 1639 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 RIMBP3Q9UFD9 1639 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 CCDC171Q6TFL3 1326 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 TRGV10A0A0A0MS01 117 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 TRAV5A0A0B4J249 113 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 IGHV1-18A0A0C4DH31 117 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 IGHV1-58A0A0C4DH39 117 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 A0A0D9SG52 128 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 TRBV10-2A0A0K0K1G8 114 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 LOC107984640A0A0U1RRK4 108 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 A0A1B0GVG6 124 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 SDHAF1A6NFY7 115 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 RFPL4AA6NLU0 287 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 RFPL4AL1F8VTS6 287 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 K7EP13 123 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 OR2H2O95918 312 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 TCL1BO95988 128 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 SHBGP04278 402 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 RNASE2P10153 161 aaKnown RBP1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 FABP2P12104 132 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 SDC2P34741 201 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 FXYD2P54710 66 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 DYNLT1P63172 113 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 HBBP68871 147 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 RELAQ04206 551 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 VMA21Q3ZAQ7 101 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 EIF5AL1Q6IS14 154 aaKnown RBP1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 LCN15Q6UWW0 184 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 DPPA3Q6W0C5 159 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 PHF5AQ7RTV0 110 aaKnown RBP1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 TCTE3Q8IZS6 198 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 RNASE11Q8TAA1 199 aaKnown RBP1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 AQP3Q92482 292 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 U3KQ87 197 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 STRCQ7RTU9 1775 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 MYO9BQ13459 2157 aa1.48□□□□□ -2.17
HMGB1P9-201ENST00000429856 MED23Q9ULK4 1368 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 IGLV3-9A0A075B6K5 115 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 A0A1B0GV90 55 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 ODF3BA8MYP8 253 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 C5orf58C9J3I9 102 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 G3V3Q6 166 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 DPM2O94777 84 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 MT-ND4LP03901 98 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 CLPSP04118 112 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 HTR1AP08908 422 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 P0DMU3 169 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 FAM231AP0DMU4 169 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 FAM231CP0DMU5 169 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 HLA-EP13747 358 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 DNAJB13P59910 316 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 HES1Q14469 280 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 PABPC1L2AQ5JQF8 200 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 RPL13AP3Q6NVV1 102 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 C4orf22Q6V702 233 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 LINC00305Q7Z4B0 112 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 TEX29Q8N6K0 151 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 SLC30A7Q8NEW0 376 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 TSTD1Q8NFU3 115 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 OR4E2Q8NGC2 313 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 LXNQ9BS40 222 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 SMIM3Q9BZL3 60 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 TCEAL2Q9H3H9 227 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 TAF9BQ9HBM6 251 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 CBLN4Q9NTU7 201 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 MPDZO75970 2070 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 TRAPPC8Q9Y2L5 1435 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 MICAL3Q7RTP6 2002 aa1.47□□□□□ -2.17
HMGB1P9-201ENST00000429856 A2MP01023 1474 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 ZFHX2Q9C0A1 2572 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 IGHV3-64A0A075B6Q5 118 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 A0A096LPI6 279 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 TRBV7-6A0A0J9YX20 115 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 C7orf71A4D174 169 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 CCDC160A6NGH7 325 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 LINC00587B1AMM8 73 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 H3BMG7 143 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 LY6LH3BQJ8 138 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 HIST1H2BKO60814 126 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 SULT1C4O75897 302 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 HIST1H2BJP06899 126 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 CTSGP08311 255 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 P0C880 135 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 COX6A1P12074 109 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 RPL35P42766 123 aaKnown RBP1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 NDUFA6P56556 154 aa1.46□□□□□ -2.18
HMGB1P9-201ENST00000429856 TAF9Q16594 264 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms