RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 MGST2Q99735 147 aa12.83□□□□□ -0.36
CTSD-203ENST00000429746 RNF126Q9BV68 326 aa12.83□□□□□ -0.36
CTSD-203ENST00000429746 SLC45A2Q9UMX9 530 aa12.83□□□□□ -0.36
CTSD-203ENST00000429746 SMCO3A2RU48 225 aa12.82□□□□□ -0.36
CTSD-203ENST00000429746 L7N2F9 121 aa12.82□□□□□ -0.36
CTSD-203ENST00000429746 FABP1P07148 127 aa12.82□□□□□ -0.36
CTSD-203ENST00000429746 CXCL3P19876 107 aa12.82□□□□□ -0.36
CTSD-203ENST00000429746 CAV2P51636 162 aa12.82□□□□□ -0.36
CTSD-203ENST00000429746 DEFB131AP59861 70 aa12.82□□□□□ -0.36
CTSD-203ENST00000429746 VAMP2P63027 116 aa12.82□□□□□ -0.36
CTSD-203ENST00000429746 SLC38A11Q08AI6 406 aa12.82□□□□□ -0.36
CTSD-203ENST00000429746 CASC10Q5T4H9 136 aa12.82□□□□□ -0.36
CTSD-203ENST00000429746 SIGLEC15Q6ZMC9 328 aa12.82□□□□□ -0.36
CTSD-203ENST00000429746 HELTA6NFD8 242 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 CFDP00746 253 aaPredicted RBP12.81□□□□□ -0.36
CTSD-203ENST00000429746 LINC00869P0C866 280 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 SULT1A1P50225 295 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 C1orf194Q5T5A4 169 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 LEMD1Q68G75 181 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 TEPPQ6URK8 271 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 BPIFCQ8NFQ6 507 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 NARS2Q96I59 477 aaKnown RBP12.81□□□□□ -0.36
CTSD-203ENST00000429746 OVOL2Q9BRP0 275 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 NRN1Q9NPD7 142 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 WDR83OSQ9Y284 106 aa12.81□□□□□ -0.36
CTSD-203ENST00000429746 ZNF98A6NK75 572 aa12.8□□□□□ -0.36
CTSD-203ENST00000429746 H3BRN7 92 aa12.8□□□□□ -0.36
CTSD-203ENST00000429746 DNASE2O00115 360 aaPredicted RBP12.8□□□□□ -0.36
CTSD-203ENST00000429746 AGPAT2O15120 278 aa12.8□□□□□ -0.36
CTSD-203ENST00000429746 ZNF688P0C7X2 276 aa12.8□□□□□ -0.36
CTSD-203ENST00000429746 LYL1P12980 280 aa12.8□□□□□ -0.36
CTSD-203ENST00000429746 BCAP31P51572 246 aa12.8□□□□□ -0.36
CTSD-203ENST00000429746 RPL11P62913 178 aaKnown RBP12.8□□□□□ -0.36
CTSD-203ENST00000429746 TMEM217Q8N7C4 229 aa12.8□□□□□ -0.36
CTSD-203ENST00000429746 PPP1R1CQ8WVI7 109 aa12.8□□□□□ -0.36
CTSD-203ENST00000429746 SLC25A32Q9H2D1 315 aa12.8□□□□□ -0.36
CTSD-203ENST00000429746 MGAT4CQ9UBM8 478 aa12.8□□□□□ -0.36
CTSD-203ENST00000429746 KIR2DL5BA0A0G2JN68 375 aa12.79□□□□□ -0.36
CTSD-203ENST00000429746 KIR2DL5BA0A0G2JPC4 375 aa12.79□□□□□ -0.36
CTSD-203ENST00000429746 GIG44P09565 113 aaPredicted RBP12.79□□□□□ -0.36
CTSD-203ENST00000429746 ORM2P19652 201 aa12.79□□□□□ -0.36
CTSD-203ENST00000429746 AP2S1P53680 142 aaPredicted RBP12.79□□□□□ -0.36
CTSD-203ENST00000429746 SELENOTP62341 195 aa12.79□□□□□ -0.36
CTSD-203ENST00000429746 KIR2DL5AQ8N109 375 aa12.79□□□□□ -0.36
CTSD-203ENST00000429746 KIR2DL5BQ8NHK3 375 aa12.79□□□□□ -0.36
CTSD-203ENST00000429746 SCRT1Q9BWW7 348 aa12.79□□□□□ -0.36
CTSD-203ENST00000429746 PLECQ15149 4684 aaKnown RBP12.79□□□□□ -0.36
CTSD-203ENST00000429746 SACSQ9NZJ4 4579 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 MRPS12O15235 138 aaKnown RBP12.78□□□□□ -0.36
CTSD-203ENST00000429746 SSNA1O43805 119 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 MPC2O95563 127 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 RPL35AP18077 110 aaKnown RBP12.78□□□□□ -0.36
CTSD-203ENST00000429746 PVALBP20472 110 aaPredicted RBP12.78□□□□□ -0.36
CTSD-203ENST00000429746 NUP62P37198 522 aaPredicted RBP12.78□□□□□ -0.36
CTSD-203ENST00000429746 CMC4P56277 68 aaPredicted RBP12.78□□□□□ -0.36
CTSD-203ENST00000429746 PRR20EP86478 221 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 PRR20CP86479 221 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 PRR20DP86480 221 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 PRR20BP86481 221 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 PRR20AP86496 221 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 EWSR1Q01844 656 aaKnown RBP eCLIP12.78□□□□□ -0.36
CTSD-203ENST00000429746 NHLH2Q02577 135 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 LRRC37A5PQ49AS3 106 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 TRPT1Q86TN4 253 aaKnown RBP12.78□□□□□ -0.36
CTSD-203ENST00000429746 OR11H7Q8NGC8 314 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 OR1B1Q8NGR6 318 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 UHRF2Q96PU4 802 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 SHANK2-AS3Q9BTD1 123 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 SLC25A39Q9BZJ4 359 aaPredicted RBP12.78□□□□□ -0.36
CTSD-203ENST00000429746 SEPSECSQ9HD40 501 aaKnown RBP12.78□□□□□ -0.36
CTSD-203ENST00000429746 DOK5Q9P104 306 aa12.78□□□□□ -0.36
CTSD-203ENST00000429746 E5RGE8 158 aa12.77□□□□□ -0.37
CTSD-203ENST00000429746 CYCSP99999 105 aaKnown RBP12.77□□□□□ -0.37
CTSD-203ENST00000429746 OXA1LQ15070 435 aa12.77□□□□□ -0.37
CTSD-203ENST00000429746 CHAC2Q8WUX2 184 aa12.77□□□□□ -0.37
CTSD-203ENST00000429746 TMEM37Q8WXS4 190 aa12.77□□□□□ -0.37
CTSD-203ENST00000429746 UQCC1Q9NVA1 299 aa12.77□□□□□ -0.37
CTSD-203ENST00000429746 RYR3Q15413 4870 aa12.77□□□□□ -0.37
CTSD-203ENST00000429746 KNCNA6PVL3 124 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 S100A11P31949 105 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 DEFB1P60022 68 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 FCN2Q15485 313 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 MORN5Q5VZ52 161 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 Q6ZWC4 215 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 LYSTQ99698 3801 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 TMEM147Q9BVK8 224 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 FBXL17Q9UF56 701 aa12.76□□□□□ -0.37
CTSD-203ENST00000429746 HYPMO75409 117 aa12.75□□□□□ -0.37
CTSD-203ENST00000429746 OPCMLQ14982 345 aa12.75□□□□□ -0.37
CTSD-203ENST00000429746 PSMG4Q5JS54 123 aa12.75□□□□□ -0.37
CTSD-203ENST00000429746 GDF5OSQ5U4N7 250 aa12.75□□□□□ -0.37
CTSD-203ENST00000429746 OR8I2Q8N0Y5 310 aa12.75□□□□□ -0.37
CTSD-203ENST00000429746 ARL6Q9H0F7 186 aa12.75□□□□□ -0.37
CTSD-203ENST00000429746 HIGD1AQ9Y241 93 aa12.75□□□□□ -0.37
CTSD-203ENST00000429746 TENM2Q9NT68 2774 aa12.74□□□□□ -0.37
CTSD-203ENST00000429746 TRAV8-2A0A0B4J237 113 aa12.74□□□□□ -0.37
CTSD-203ENST00000429746 UBE2L5PA0A1B0GUS4 154 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms