RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 RUSC1-AS1Q66K80 236 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 PLEKHB2Q96CS7 222 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 IGHV3-64A0A075B6Q5 118 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 IGKV2D-24A0A075B6R9 120 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 TRAV8-4A0A0B4J246 113 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 SMIM10L1P0DMW3 83 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 CCL1P22362 96 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 ZNF345Q14585 488 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 DEFB113Q30KQ7 82 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 SMIM10Q96HG1 83 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 DICER1Q9UPY3 1922 aaKnown RBP4.72□□□□□ -1.65
HERC4-206ENST00000427635 IGHV1-69DA0A0B4J2H0 117 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 C7orf77A4D0Y5 90 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 C17orf98A8MV24 154 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 VCYO14598 125 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 IGHV1-69P01742 117 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 AZU1P20160 251 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 GATA2P23769 480 aaPredicted RBP4.72□□□□□ -1.65
HERC4-206ENST00000427635 MORN2Q502X0 79 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 UQCR10Q9UDW1 63 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 A0A087X0K7 114 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 MSRB3Q8IXL7 192 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 ORAOV1Q8WV07 137 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 KNL1Q8NG31 2342 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 TRBV5-5A0A0J9YX44 114 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 SRRM4A7MD48 611 aaKnown RBP4.72□□□□□ -1.65
HERC4-206ENST00000427635 ZNF250P15622 560 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 DAZ1Q9NQZ3 744 aaKnown RBP4.72□□□□□ -1.65
HERC4-206ENST00000427635 NHP2Q9NX24 153 aaKnown RBP4.72□□□□□ -1.65
HERC4-206ENST00000427635 SCN3AQ9NY46 2000 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 MLNRO43193 412 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 SAA4P35542 130 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 FOXF2Q12947 444 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 STPG2Q8N412 459 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 C1orf159Q96HA4 380 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 PSG8Q9UQ74 426 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 SCN9AQ15858 1988 aa4.72□□□□□ -1.65
HERC4-206ENST00000427635 IGKV1OR2-108A0A075B7D4 117 aa4.71□□□□□ -1.65
HERC4-206ENST00000427635 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.71□□□□□ -1.65
HERC4-206ENST00000427635 DPM2O94777 84 aa4.71□□□□□ -1.65
HERC4-206ENST00000427635 NANOS3P60323 173 aaKnown RBP4.71□□□□□ -1.65
HERC4-206ENST00000427635 KLF5Q13887 457 aaPredicted RBP4.71□□□□□ -1.65
HERC4-206ENST00000427635 MRPL53Q96EL3 112 aaKnown RBP4.71□□□□□ -1.65
HERC4-206ENST00000427635 NPC2P61916 151 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 APCDD1LQ8NCL9 501 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 GPHA2Q96T91 129 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 V9GYH0 126 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 WDR90Q96KV7 1748 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 BUB1B-PAK6H3BSN5 160 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 INAFM2P0DMQ5 153 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 NDPQ00604 133 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 MDS2Q8NDY4 140 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 COQ2Q96H96 371 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 RHPN1-AS1Q9BWJ2 59 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 TRIP12Q14669 1992 aaPredicted RBP4.71□□□□□ -1.66
HERC4-206ENST00000427635 A0A1B0GWB2 263 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 IZUMO1RA6ND01 250 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 LAGE3Q14657 143 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 TCTEX1D4Q5JR98 221 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 ZNF503Q96F45 646 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 IL36BQ9NZH7 164 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 XCL2Q9UBD3 114 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 LAMB2P55268 1798 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 THSD7AQ9UPZ6 1657 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 F8W735 103 aaPredicted RBP4.71□□□□□ -1.66
HERC4-206ENST00000427635 C1orf100Q5SVJ3 147 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 MIR17HGQ75NE6 70 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 C9orf62Q8N4C0 152 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 IGF2BP2-AS1Q96M15 143 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 RPUSD1Q9UJJ7 312 aaKnown RBP4.71□□□□□ -1.66
HERC4-206ENST00000427635 F5P12259 2224 aa4.71□□□□□ -1.66
HERC4-206ENST00000427635 MYMXA0A1B0GTQ4 84 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 ZNF138P52744 262 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 PAX9P55771 341 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 HIST1H4AP62805 103 aaKnown RBP4.7□□□□□ -1.66
HERC4-206ENST00000427635 CD300EQ496F6 205 aaPredicted RBP4.7□□□□□ -1.66
HERC4-206ENST00000427635 TM2D2Q9BX73 214 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 DLEC1Q9Y238 1755 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 CROCCQ5TZA2 2017 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 GAGE12JA6NER3 117 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 CD5LO43866 347 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 COL8A2P25067 703 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 UBE2E1P51965 193 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 RND3P61587 244 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 TFF3Q07654 80 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 CD300CQ08708 224 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 GAGE4Q13068 117 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 GAGE13Q4V321 117 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 Q6ZS92 163 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 NUP205Q92621 2012 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 TRAV8-2A0A0B4J237 113 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 TRAV13-1A0A0B4J241 112 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 GAGE12BA1L429 117 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 B5MCH6 92 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 G3V4G9 280 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 GAGE7O76087 117 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 GAGE12FP0CL80 117 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 GAGE12GP0CL81 117 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 GAGE12IP0CL82 117 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 ZNF474Q6S9Z5 364 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms