RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 PGPA6NDG6 321 aa17.02■□□□□ 0.32
CNEP1R1-202ENST00000427478 H3BRN7 92 aa17.02■□□□□ 0.32
CNEP1R1-202ENST00000427478 GGCTO75223 188 aaKnown RBP17.02■□□□□ 0.32
CNEP1R1-202ENST00000427478 SLC25A5P05141 298 aaKnown RBP17.02■□□□□ 0.32
CNEP1R1-202ENST00000427478 CNN1P51911 297 aaKnown RBP17.02■□□□□ 0.32
CNEP1R1-202ENST00000427478 USF2Q15853 346 aaPredicted RBP17.02■□□□□ 0.32
CNEP1R1-202ENST00000427478 AKR1D1P51857 326 aa17.02■□□□□ 0.31
CNEP1R1-202ENST00000427478 TMEM14CQ9P0S9 112 aa17.02■□□□□ 0.31
CNEP1R1-202ENST00000427478 CDC42EP3Q9UKI2 254 aa17.02■□□□□ 0.31
CNEP1R1-202ENST00000427478 A0A096LNT2 108 aa17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 TRAV34A0A0B4J273 112 aa17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 PPP5D1E7EU14 171 aa17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 TGOLN2O43493 480 aa17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 AMY1AP04745 511 aa17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 ERVFC1-1P60608 527 aa17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 LY6EQ16553 131 aa17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 C15orf32Q32M92 178 aa17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 BCL6BQ8N143 479 aaPredicted RBP17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 SRD5A3Q9H8P0 318 aa17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 RPH3ALQ9UNE2 315 aa17.01■□□□□ 0.31
CNEP1R1-202ENST00000427478 SLC17A3O00476 420 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 IGLV2-8P01709 118 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 RHOGP84095 191 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 NHLRC2Q8NBF2 726 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 MAPK1IP1LQ8NDC0 245 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 Q9H3A6 140 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 ZNF586Q9NXT0 402 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 EPDR1Q9UM22 224 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 H3BUX3 64 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 FCGR2BP31994 310 aaPredicted RBP17■□□□□ 0.31
CNEP1R1-202ENST00000427478 TAS2R60P59551 318 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 FABP9Q0Z7S8 132 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 LINC01356Q8N9X3 169 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 VN1R17PQ8TDU5 208 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 IMMP2LQ96T52 175 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 TCEAL7Q9BRU2 100 aa17■□□□□ 0.31
CNEP1R1-202ENST00000427478 LRRK2Q5S007 2527 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 MGST1P10620 155 aaKnown RBP16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 TMEM68Q96MH6 324 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 ANKRD17O75179 2603 aaKnown RBP16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 AP4M1O00189 453 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST1H2BKO60814 126 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST1H2BJP06899 126 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 CTSGP08311 255 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST1H1EP10412 219 aaKnown RBP16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST1H2BOP23527 126 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 GATA3P23771 443 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST1H2BBP33778 126 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST1H2BDP58876 126 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST1H2BCP62807 126 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST2H2BEQ16778 126 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 C9orf152Q5JTZ5 239 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 BPIFA4PQ86YQ2 179 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 FRZBQ92765 325 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST1H2BHQ93079 126 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 TXN2Q99757 166 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST1H2BNQ99877 126 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 HIST1H2BMQ99879 126 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 CHRDL1Q9BU40 450 aa16.99■□□□□ 0.31
CNEP1R1-202ENST00000427478 UBE2CO00762 179 aa16.98■□□□□ 0.31
CNEP1R1-202ENST00000427478 ISLRO14498 428 aa16.98■□□□□ 0.31
CNEP1R1-202ENST00000427478 SCGB2A1O75556 95 aa16.98■□□□□ 0.31
CNEP1R1-202ENST00000427478 GCGP01275 180 aa16.98■□□□□ 0.31
CNEP1R1-202ENST00000427478 FOXL1Q12952 345 aa16.98■□□□□ 0.31
CNEP1R1-202ENST00000427478 MS4A10Q96PG2 267 aa16.98■□□□□ 0.31
CNEP1R1-202ENST00000427478 RNASE7Q9H1E1 156 aaKnown RBP16.98■□□□□ 0.31
CNEP1R1-202ENST00000427478 GPR183P32249 361 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 KLK9Q2XQG4 91 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 ZNF502Q8TBZ5 544 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 LINC00527Q9UJ94 153 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 KLK9Q9UKQ9 250 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 TRBV9A0A0B4J1U6 114 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 ZNF98A6NK75 572 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 PHOX2AO14813 284 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 TRGC1P0CF51 173 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 ADMP35318 185 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 C5orf17Q8NAS9 161 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 SGK494Q96LW2 274 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 IL36BQ9NZH7 164 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 V9GYV3 84 aa16.97■□□□□ 0.31
CNEP1R1-202ENST00000427478 NDUFA6P56556 154 aa16.96■□□□□ 0.31
CNEP1R1-202ENST00000427478 UBE2G1P62253 170 aa16.96■□□□□ 0.31
CNEP1R1-202ENST00000427478 OR4F17Q8NGA8 305 aa16.96■□□□□ 0.31
CNEP1R1-202ENST00000427478 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.96■□□□□ 0.317e-10■■■□□ 14.7
CNEP1R1-202ENST00000427478 TRAV41A0A0B4J266 112 aa16.96■□□□□ 0.3
CNEP1R1-202ENST00000427478 ZNF320A2RRD8 509 aa16.96■□□□□ 0.3
CNEP1R1-202ENST00000427478 A6NDX4 124 aa16.96■□□□□ 0.3
CNEP1R1-202ENST00000427478 TYMSP04818 313 aa16.96■□□□□ 0.3
CNEP1R1-202ENST00000427478 BAGE2Q86Y30 109 aa16.96■□□□□ 0.3
CNEP1R1-202ENST00000427478 EXOC3-AS1Q8N2X6 119 aa16.96■□□□□ 0.3
CNEP1R1-202ENST00000427478 ATG101Q9BSB4 218 aa16.96■□□□□ 0.3
CNEP1R1-202ENST00000427478 OTORQ9NRC9 128 aa16.96■□□□□ 0.3
CNEP1R1-202ENST00000427478 IGHV3-35A0A0C4DH35 117 aa16.95■□□□□ 0.3
CNEP1R1-202ENST00000427478 RNF223E7ERA6 249 aa16.95■□□□□ 0.3
CNEP1R1-202ENST00000427478 IGLC2P0DOY2 106 aa16.95■□□□□ 0.3
CNEP1R1-202ENST00000427478 TMEM183BQ1AE95 376 aa16.95■□□□□ 0.3
CNEP1R1-202ENST00000427478 C17orf77Q96MU5 243 aa16.95■□□□□ 0.3
CNEP1R1-202ENST00000427478 S100A7AQ86SG5 101 aa16.94■□□□□ 0.3
CNEP1R1-202ENST00000427478 OSTCQ9NRP0 149 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms