RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CFHR4Q92496 578 aa9.17□□□□□ -0.94
UBR4-207ENST00000425413 HIGD1AQ9Y241 93 aa9.17□□□□□ -0.94
UBR4-207ENST00000425413 ARL2-SNX15V9GYD0 113 aa9.17□□□□□ -0.94
UBR4-207ENST00000425413 I3L2K1 104 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 SERF1AO75920 110 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 IGKV1-17P01599 117 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 CEACAM3P40198 252 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 EXOC3-AS1Q8N2X6 119 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 OR11H6Q8NGC7 330 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 SAMD10Q9BYL1 202 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 CDC42EP3Q9UKI2 254 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 LY96Q9Y6Y9 160 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 NDPQ00604 133 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 C17orf77Q96MU5 243 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 NOL4LQ96MY1 436 aaPredicted RBP9.16□□□□□ -0.94
UBR4-207ENST00000425413 TBX15Q96SF7 602 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 NAGKQ9UJ70 344 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 EPDR1Q9UM22 224 aa9.16□□□□□ -0.94
UBR4-207ENST00000425413 USP9XQ93008 2570 aaPredicted RBP9.16□□□□□ -0.94
UBR4-207ENST00000425413 IGHV3OR16-10A0A075B7F0 116 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 SH2D7A6NKC9 451 aaPredicted RBP9.15□□□□□ -0.94
UBR4-207ENST00000425413 K7EIM0 57 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 CX3CL1P78423 397 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 TOMM20LQ6UXN7 152 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 OSTCQ9NRP0 149 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 A6NNC1 897 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 YPEL3P61236 119 aaPredicted RBP9.15□□□□□ -0.94
UBR4-207ENST00000425413 C5orf64Q2M2E5 130 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 HSPB9Q9BQS6 159 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 SLC25A39Q9BZJ4 359 aaPredicted RBP9.15□□□□□ -0.94
UBR4-207ENST00000425413 BPESC1Q9GZL8 116 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 Q9H3A6 140 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 IGSF10Q6WRI0 2623 aa9.15□□□□□ -0.94
UBR4-207ENST00000425413 IL4P05112 153 aa9.15□□□□□ -0.95
UBR4-207ENST00000425413 GP9P14770 177 aa9.15□□□□□ -0.95
UBR4-207ENST00000425413 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.95
UBR4-207ENST00000425413 NUDT11Q96G61 164 aa9.15□□□□□ -0.95
UBR4-207ENST00000425413 NDUFAF3Q9BU61 184 aa9.15□□□□□ -0.95
UBR4-207ENST00000425413 TP53TG3Q9ULZ0 132 aa9.15□□□□□ -0.95
UBR4-207ENST00000425413 POLR3KQ9Y2Y1 108 aaPredicted RBP9.15□□□□□ -0.95
UBR4-207ENST00000425413 FAM208BQ5VWN6 2430 aa9.14□□□□□ -0.95
UBR4-207ENST00000425413 FAM120AOSQ5T036 256 aa9.14□□□□□ -0.95
UBR4-207ENST00000425413 DTX2Q86UW9 622 aa9.14□□□□□ -0.95
UBR4-207ENST00000425413 ITLN2Q8WWU7 325 aaPredicted RBP9.14□□□□□ -0.95
UBR4-207ENST00000425413 ODF3BA8MYP8 253 aa9.14□□□□□ -0.95
UBR4-207ENST00000425413 M0R1W7 72 aa9.14□□□□□ -0.95
UBR4-207ENST00000425413 HOXB4P17483 251 aaPredicted RBP9.14□□□□□ -0.95
UBR4-207ENST00000425413 CAMPP49913 170 aa9.14□□□□□ -0.95
UBR4-207ENST00000425413 TPPP2P59282 170 aa9.14□□□□□ -0.95
UBR4-207ENST00000425413 ATG101Q9BSB4 218 aa9.14□□□□□ -0.95
UBR4-207ENST00000425413 ZNF586Q9NXT0 402 aa9.14□□□□□ -0.95
UBR4-207ENST00000425413 ZFHX3Q15911 3703 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.13□□□□□ -0.956e-7■■■■□ 20.9
UBR4-207ENST00000425413 EREGO14944 169 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 FCGR2BP31994 310 aaPredicted RBP9.13□□□□□ -0.95
UBR4-207ENST00000425413 PVRIGQ6DKI7 326 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 LINC00322Q6ZN03 302 aaPredicted RBP9.13□□□□□ -0.95
UBR4-207ENST00000425413 Q6ZWC4 215 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 STXBP6Q8NFX7 210 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 POLQO75417 2590 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 GNG7O60262 68 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 OR2J3O76001 311 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 TMEM11P17152 192 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 TAS2R60P59551 318 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 TDRG1Q3Y452 100 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 Q56UQ5 140 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 ZNF705AQ6ZN79 300 aaPredicted RBP9.13□□□□□ -0.95
UBR4-207ENST00000425413 GOLT1AQ6ZVE7 132 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 VN1R17PQ8TDU5 208 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 ARPC1AQ92747 370 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 SSBP4Q9BWG4 385 aaPredicted RBP9.13□□□□□ -0.95
UBR4-207ENST00000425413 CELSR2Q9HCU4 2923 aa9.13□□□□□ -0.95
UBR4-207ENST00000425413 LINC00310P59036 64 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 TCF24Q7RTU0 167 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 GNB4Q9HAV0 340 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 PMCHP20382 165 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 MYCNOSP40205 109 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 KRTDAPP60985 99 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 TMEM136Q6ZRR5 245 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 PRNTQ86SH4 94 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 RNF5Q99942 180 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 PRORYQ9H606 182 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 PAM16Q9Y3D7 125 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 OR2T8A6NH00 312 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 SRIP30626 198 aa9.12□□□□□ -0.95
UBR4-207ENST00000425413 TCRAP04437 139 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 SSTP61278 116 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 ECSCRQ19T08 205 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 CIARTQ8N365 385 aaPredicted RBP9.11□□□□□ -0.95
UBR4-207ENST00000425413 C5orf17Q8NAS9 161 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 TMEM68Q96MH6 324 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 FANCD2OSQ96PS1 177 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 NEU1Q99519 415 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 ZNF331Q9NQX6 463 aaPredicted RBP9.11□□□□□ -0.95
UBR4-207ENST00000425413 SMIM27A0A1W2PRY6 76 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 HIGD1CA8MV81 97 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 M0R3E3 92 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 NDUFA3O95167 84 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 NDUFB8O95169 186 aa9.11□□□□□ -0.95
UBR4-207ENST00000425413 TMEM183BQ1AE95 376 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms