RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 PLP1P60201 277 aa15.42■□□□□ 0.06
HMGXB4-203ENST00000420166 PAFAH1B2P68402 229 aa15.42■□□□□ 0.06
HMGXB4-203ENST00000420166 RAB31Q13636 194 aa15.42■□□□□ 0.06
HMGXB4-203ENST00000420166 OR1B1Q8NGR6 318 aa15.42■□□□□ 0.06
HMGXB4-203ENST00000420166 PPP1R14BQ96C90 147 aa15.42■□□□□ 0.06
HMGXB4-203ENST00000420166 C19orf73Q9NVV2 129 aa15.42■□□□□ 0.06
HMGXB4-203ENST00000420166 HSPB11Q9Y547 144 aa15.42■□□□□ 0.06
HMGXB4-203ENST00000420166 HELTA6NFD8 242 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 A8MZ25 164 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 TFPI2P48307 235 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 CAMLGP49069 296 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 FGL1Q08830 312 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 CLINT1Q14677 625 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 C1orf194Q5T5A4 169 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 B9D2Q9BPU9 175 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 GGTLC1Q9BX51 225 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 WFDC10AQ9H1F0 79 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 MS4A6AQ9H2W1 248 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 DOK5Q9P104 306 aa15.41■□□□□ 0.06
HMGXB4-203ENST00000420166 TRAV2A0A0B4J234 112 aa15.4■□□□□ 0.06
HMGXB4-203ENST00000420166 OR11H12B2RN74 326 aa15.4■□□□□ 0.06
HMGXB4-203ENST00000420166 HYPMO75409 117 aa15.4■□□□□ 0.06
HMGXB4-203ENST00000420166 FGF7P21781 194 aa15.4■□□□□ 0.06
HMGXB4-203ENST00000420166 DEFB125Q8N687 156 aa15.4■□□□□ 0.06
HMGXB4-203ENST00000420166 STXBP6Q8NFX7 210 aa15.4■□□□□ 0.06
HMGXB4-203ENST00000420166 DNASE2O00115 360 aaPredicted RBP15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 FRMD6-AS1P0C7T7 363 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 S100A7P31151 101 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 ODF3L2Q3SX64 289 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 Q5BKY6 102 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 PXDC1Q5TGL8 231 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 SIGLEC15Q6ZMC9 328 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 WFDC3Q8IUB2 231 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 CHAC2Q8WUX2 184 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 FBXL17Q9UF56 701 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 HIGD1AQ9Y241 93 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 TGP01266 2768 aa15.39■□□□□ 0.05
HMGXB4-203ENST00000420166 MPDU1O75352 247 aa15.38■□□□□ 0.05
HMGXB4-203ENST00000420166 OR5G3P0C626 314 aa15.38■□□□□ 0.05
HMGXB4-203ENST00000420166 AP2S1P53680 142 aaPredicted RBP15.38■□□□□ 0.05
HMGXB4-203ENST00000420166 MIC13Q5XKP0 118 aa15.38■□□□□ 0.05
HMGXB4-203ENST00000420166 OR2T35Q8NGX2 323 aa15.38■□□□□ 0.05
HMGXB4-203ENST00000420166 ATP5SQ99766 215 aa15.38■□□□□ 0.05
HMGXB4-203ENST00000420166 FAM110AQ9BQ89 295 aa15.38■□□□□ 0.05
HMGXB4-203ENST00000420166 ARL6Q9H0F7 186 aa15.38■□□□□ 0.05
HMGXB4-203ENST00000420166 TUBA4BQ9H853 241 aa15.38■□□□□ 0.05
HMGXB4-203ENST00000420166 UBQLN2Q9UHD9 624 aa15.38■□□□□ 0.05
HMGXB4-203ENST00000420166 ZNF98A6NK75 572 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 H3BRN7 92 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 K7EQG2 157 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 PRR20EP86478 221 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 PRR20CP86479 221 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 PRR20DP86480 221 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 PRR20BP86481 221 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 PRR20AP86496 221 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 OPCMLQ14982 345 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 SHANK2-AS3Q9BTD1 123 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 SLC25A39Q9BZJ4 359 aaPredicted RBP15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 SRD5A3Q9H8P0 318 aa15.37■□□□□ 0.05
HMGXB4-203ENST00000420166 RPL29P47914 159 aaKnown RBP15.36■□□□□ 0.05
HMGXB4-203ENST00000420166 PATE2Q6UY27 113 aa15.36■□□□□ 0.05
HMGXB4-203ENST00000420166 OR8I2Q8N0Y5 310 aa15.36■□□□□ 0.05
HMGXB4-203ENST00000420166 DCANP1Q8TF63 244 aa15.36■□□□□ 0.05
HMGXB4-203ENST00000420166 UHRF2Q96PU4 802 aa15.36■□□□□ 0.05
HMGXB4-203ENST00000420166 SCRT1Q9BWW7 348 aa15.36■□□□□ 0.05
HMGXB4-203ENST00000420166 NPCDR1Q9BY65 106 aa15.36■□□□□ 0.05
HMGXB4-203ENST00000420166 SMIM3Q9BZL3 60 aa15.36■□□□□ 0.05
HMGXB4-203ENST00000420166 SLC25A22Q9H936 323 aa15.36■□□□□ 0.05
HMGXB4-203ENST00000420166 NRN1Q9NPD7 142 aa15.36■□□□□ 0.05
HMGXB4-203ENST00000420166 CMC4P56277 68 aaPredicted RBP15.35■□□□□ 0.05
HMGXB4-203ENST00000420166 S100A7AQ86SG5 101 aa15.35■□□□□ 0.05
HMGXB4-203ENST00000420166 FAM24BQ8N5W8 94 aa15.35■□□□□ 0.05
HMGXB4-203ENST00000420166 AQP10Q96PS8 301 aa15.35■□□□□ 0.05
HMGXB4-203ENST00000420166 WDR61Q9GZS3 305 aaKnown RBP15.35■□□□□ 0.05
HMGXB4-203ENST00000420166 ARV1Q9H2C2 271 aa15.35■□□□□ 0.05
HMGXB4-203ENST00000420166 SLC25A32Q9H2D1 315 aa15.35■□□□□ 0.05
HMGXB4-203ENST00000420166 MAP6D1Q9H9H5 199 aa15.35■□□□□ 0.05
HMGXB4-203ENST00000420166 SLC39A9Q9NUM3 307 aa15.35■□□□□ 0.05
HMGXB4-203ENST00000420166 FXYD6-FXYD2A0A087WZ82 144 aa15.34■□□□□ 0.05
HMGXB4-203ENST00000420166 G3V3Q6 166 aa15.34■□□□□ 0.05
HMGXB4-203ENST00000420166 COX7A2P2O60397 106 aa15.34■□□□□ 0.05
HMGXB4-203ENST00000420166 B2MP61769 119 aa15.34■□□□□ 0.05
HMGXB4-203ENST00000420166 LEMD1Q68G75 181 aa15.34■□□□□ 0.05
HMGXB4-203ENST00000420166 Q6ZRG5 221 aa15.34■□□□□ 0.05
HMGXB4-203ENST00000420166 CITED4Q96RK1 184 aa15.34■□□□□ 0.05
HMGXB4-203ENST00000420166 PXMP4Q9Y6I8 212 aa15.34■□□□□ 0.05
HMGXB4-203ENST00000420166 ELOA3CA0A087WX78 387 aaPredicted RBP15.33■□□□□ 0.04
HMGXB4-203ENST00000420166 GALR1P47211 349 aa15.33■□□□□ 0.04
HMGXB4-203ENST00000420166 Q6ZNX1 250 aa15.33■□□□□ 0.04
HMGXB4-203ENST00000420166 GPR82Q96P67 336 aa15.33■□□□□ 0.04
HMGXB4-203ENST00000420166 ASCL2Q99929 193 aa15.33■□□□□ 0.04
HMGXB4-203ENST00000420166 WFDC1Q9HC57 220 aa15.33■□□□□ 0.04
HMGXB4-203ENST00000420166 RBMY1BA6NDE4 496 aaKnown RBP15.32■□□□□ 0.04
HMGXB4-203ENST00000420166 RBMY1EA6NEQ0 496 aaKnown RBP15.32■□□□□ 0.04
HMGXB4-203ENST00000420166 IFNA5P01569 189 aa15.32■□□□□ 0.04
HMGXB4-203ENST00000420166 RBMY1DP0C7P1 496 aaKnown RBP15.32■□□□□ 0.04
HMGXB4-203ENST00000420166 C10orf113Q5VZT2 155 aa15.32■□□□□ 0.04
HMGXB4-203ENST00000420166 LINC00322Q6ZN03 302 aaPredicted RBP15.32■□□□□ 0.04
HMGXB4-203ENST00000420166 APRG1Q8IVJ8 170 aa15.32■□□□□ 0.04
HMGXB4-203ENST00000420166 SBSPONQ8IVN8 264 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms