RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 SLC25A22Q9H936 323 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 PITPNC1Q9UKF7 332 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 F11RQ9Y624 299 aaKnown RBP2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 RFNGQ9Y644 331 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 ARHGAP32A7KAX9 2087 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 USP24Q9UPU5 2620 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 CHD8Q9HCK8 2581 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 ITPR1Q14643 2758 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 MALRD1Q5VYJ5 2156 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 KRTAP16-1A8MUX0 517 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 PRSS46E5RG02 174 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 E7EUB6 86 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 F8W036 122 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 H3BUX3 64 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 COX7A2P2O60397 106 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 HLA-DRB1P01911 266 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 FABP1P07148 127 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 FAM157CP0CG43 387 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGHV4-31P0DP07 118 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR10J1P30954 320 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 GPX4P36969 197 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 FHITP49789 147 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 PPT1P50897 306 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 RND2P52198 227 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 FGF8P55075 233 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 KRTAP10-3P60369 221 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 B2MP61769 119 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 RHOBP62745 196 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 EBI3Q14213 229 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 LY6EQ16553 131 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 GUK1Q16774 197 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 ECSCRQ19T08 205 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 TMEM249Q2WGJ8 235 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 BSXQ3C1V8 233 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 FAM120AOSQ5T036 256 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 MIC13Q5XKP0 118 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 CYB5R2Q6BCY4 276 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 UNQ5815/PRO19632Q6UWF5 114 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 LCN15Q6UWW0 184 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 CYP2G1PQ6ZSU1 146 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 TMEM144Q7Z5S9 345 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 Q8N6K4 173 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 Q8N9W7 124 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR1L4Q8NGR5 311 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR1P1Q8NH06 330 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 NANPQ8TBE9 248 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 SFT2D1Q8WV19 159 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 CACNG8Q8WXS5 425 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 RBM14Q96PK6 669 aaKnown RBP2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 PFDN5Q99471 154 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 RNF2Q99496 336 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 MGST2Q99735 147 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 SSX3Q99909 188 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 FAM103A1Q9BTL3 118 aaKnown RBP2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 TMEM231Q9H6L2 316 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 VSIRQ9H7M9 311 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 MANBALQ9NQG1 85 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 RPRMQ9NS64 109 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 SLC39A9Q9NUM3 307 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 THYN1Q9P016 225 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 GNG13Q9P2W3 67 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 USF3Q68DE3 2245 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 SPTA1P02549 2419 aa2.94□□□□□ -1.94
HMGB3P20-201ENST00000417997 A0A096LNT2 108 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGHV3-21A0A0B4J1V1 117 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 MDFIC2A0A1B0GVS7 189 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 A0A1B0GW64 132 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 TCRBV4S1A1TA0A5B7 111 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 M0QZK8 103 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 FCN1O00602 326 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 UBE2CO00762 179 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 ATP6V0E1O15342 81 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 HMGB3O15347 200 aaKnown RBP2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 GNG7O60262 68 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGHV3-48P01763 117 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 SFTA3P0C7M3 94 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 LINC00869P0C866 280 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 HIST1H1BP16401 226 aaKnown RBP2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 CTRB1P17538 263 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 HNF1AP20823 631 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 SRP14P37108 136 aaKnown RBP2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 TAGLN2P37802 199 aaKnown RBP2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 RPL29P47914 159 aaKnown RBP2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 PSMB3P49720 205 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 CEBPGP53567 150 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 TAS2R45P59539 299 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 LYZP61626 148 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 SELENOTP62341 195 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 CX3CL1P78423 397 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 DEFA5Q01523 94 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 GAMTQ14353 236 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 HAGHQ16775 308 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 Q56UQ5 140 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 KHDC3LQ587J8 217 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 FAM78BQ5VT40 261 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 CTRB2Q6GPI1 263 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 ZNF562Q6V9R5 426 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 SPNS3Q6ZMD2 512 aa2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 CENPVQ7Z7K6 275 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P20-201ENST00000417997 EIF4E3Q8N5X7 224 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms