RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 IGKV1-17P01599 117 aa13.34□□□□□ -0.27
NUP50-203ENST00000407019 MLST8Q9BVC4 326 aa13.34□□□□□ -0.27
NUP50-203ENST00000407019 MRPL27Q9P0M9 148 aaKnown RBP13.34□□□□□ -0.27
NUP50-203ENST00000407019 C1orf194Q5T5A4 169 aa13.33□□□□□ -0.27
NUP50-203ENST00000407019 SIGLECL1Q8N7X8 197 aa13.33□□□□□ -0.27
NUP50-203ENST00000407019 KCNS1Q96KK3 526 aa13.33□□□□□ -0.27
NUP50-203ENST00000407019 NEU1Q99519 415 aa13.33□□□□□ -0.27
NUP50-203ENST00000407019 ZNF586Q9NXT0 402 aa13.33□□□□□ -0.27
NUP50-203ENST00000407019 ANKHD1Q8IWZ3 2542 aaKnown RBP13.33□□□□□ -0.28
NUP50-203ENST00000407019 KIR2DL5BA0A0G2JN68 375 aa13.33□□□□□ -0.28
NUP50-203ENST00000407019 KIR2DL5BA0A0G2JPC4 375 aa13.33□□□□□ -0.28
NUP50-203ENST00000407019 HIGD1CA8MV81 97 aa13.33□□□□□ -0.28
NUP50-203ENST00000407019 CD33P20138 364 aa13.33□□□□□ -0.28
NUP50-203ENST00000407019 GPR6P46095 362 aaPredicted RBP13.33□□□□□ -0.28
NUP50-203ENST00000407019 SLAQ13239 276 aa13.33□□□□□ -0.28
NUP50-203ENST00000407019 HES1Q14469 280 aa13.33□□□□□ -0.28
NUP50-203ENST00000407019 TOMM20LQ6UXN7 152 aa13.33□□□□□ -0.28
NUP50-203ENST00000407019 KIR2DL5AQ8N109 375 aa13.33□□□□□ -0.28
NUP50-203ENST00000407019 IGFBPL1Q8WX77 278 aa13.33□□□□□ -0.28
NUP50-203ENST00000407019 RBM14Q96PK6 669 aaKnown RBP13.33□□□□□ -0.28
NUP50-203ENST00000407019 FAM103A1Q9BTL3 118 aaKnown RBP13.33□□□□□ -0.28
NUP50-203ENST00000407019 RPP21Q9H633 154 aaKnown RBP13.33□□□□□ -0.28
NUP50-203ENST00000407019 ZMAT5Q9UDW3 170 aaKnown RBP13.33□□□□□ -0.28
NUP50-203ENST00000407019 A0A1W2PRD5 423 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 A0A1W2PRF3 423 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 A0A1W2PRM7 423 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 CD24P25063 80 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 ZNF492Q9P255 531 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 GPX1P07203 203 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 NHLH1Q02575 133 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 C5orf64Q2M2E5 130 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 ATP5L2Q7Z4Y8 100 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 DTX2Q86UW9 622 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 RCHY1Q96PM5 261 aa13.32□□□□□ -0.28
NUP50-203ENST00000407019 H3BRN7 92 aa13.31□□□□□ -0.28
NUP50-203ENST00000407019 SHANK2-AS3Q9BTD1 123 aa13.31□□□□□ -0.28
NUP50-203ENST00000407019 P01737 135 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 CDKN1AP38936 164 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 AMTP48728 403 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 CT83Q5H943 113 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 GDF5OSQ5U4N7 250 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 LINC00322Q6ZN03 302 aaPredicted RBP13.3□□□□□ -0.28
NUP50-203ENST00000407019 Q86TA4 180 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 KIR3DL3Q8N743 410 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 PRSS22Q9GZN4 317 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 TBL2Q9Y4P3 447 aaKnown RBP13.3□□□□□ -0.28
NUP50-203ENST00000407019 A0A1W2PS18 150 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 C19orf71A6NCJ1 209 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 FBLN7Q53RD9 439 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 CCDC144NLQ6NUI1 221 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 TEX43Q6ZNM6 134 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 C1orf122Q6ZSJ8 110 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 VMO1Q7Z5L0 202 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 BPIFA4PQ86YQ2 179 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 TMEM190Q8WZ59 177 aa13.3□□□□□ -0.28
NUP50-203ENST00000407019 A8MWL6 223 aa13.29□□□□□ -0.28
NUP50-203ENST00000407019 PMCHP20382 165 aa13.29□□□□□ -0.28
NUP50-203ENST00000407019 EXOC3-AS1Q8N2X6 119 aa13.29□□□□□ -0.28
NUP50-203ENST00000407019 OR4F17Q8NGA8 305 aa13.29□□□□□ -0.28
NUP50-203ENST00000407019 RNF125Q96EQ8 232 aa13.29□□□□□ -0.28
NUP50-203ENST00000407019 FBXL7Q9UJT9 491 aa13.29□□□□□ -0.28
NUP50-203ENST00000407019 RNF24Q9Y225 148 aa13.29□□□□□ -0.28
NUP50-203ENST00000407019 A0A1B0GXF2 115 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 NPIPB5A8MRT5 1133 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 ZNF324O75467 553 aaPredicted RBP13.28□□□□□ -0.28
NUP50-203ENST00000407019 LBHQ53QV2 105 aaPredicted RBP13.28□□□□□ -0.28
NUP50-203ENST00000407019 TCF24Q7RTU0 167 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 ZNF491Q8N8L2 437 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 C18orf32Q8TCD1 76 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 ARPC1AQ92747 370 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 DAZAP1Q96EP5 407 aaKnown RBP13.28□□□□□ -0.28
NUP50-203ENST00000407019 TRBV19A0A075B6N1 114 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 TRAV30A0A087WSZ9 112 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 A6NNC1 897 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 OOSP1A8MZH6 123 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 VWC2LB2RUY7 222 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 OR2J3O76001 311 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 IL4P05112 153 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 CAMPP49913 170 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 KLF17Q5JT82 389 aaPredicted RBP13.28□□□□□ -0.28
NUP50-203ENST00000407019 ZNF562Q6V9R5 426 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 GOLT1AQ6ZVE7 132 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 VN1R17PQ8TDU5 208 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 NRN1Q9NPD7 142 aa13.28□□□□□ -0.28
NUP50-203ENST00000407019 IGLV11-55A0A075B6I3 123 aa13.27□□□□□ -0.28
NUP50-203ENST00000407019 HLA-DRB1P01911 266 aa13.27□□□□□ -0.28
NUP50-203ENST00000407019 HOXB4P17483 251 aaPredicted RBP13.27□□□□□ -0.28
NUP50-203ENST00000407019 KRTDAPP60985 99 aa13.27□□□□□ -0.28
NUP50-203ENST00000407019 DYNAPQ8N1N2 210 aa13.27□□□□□ -0.28
NUP50-203ENST00000407019 LINC00469Q8N7U9 141 aa13.27□□□□□ -0.28
NUP50-203ENST00000407019 C2orf88Q9BSF0 95 aa13.27□□□□□ -0.28
NUP50-203ENST00000407019 RNF114Q9Y508 228 aa13.27□□□□□ -0.28
NUP50-203ENST00000407019 SOX21Q9Y651 276 aaPredicted RBP13.27□□□□□ -0.28
NUP50-203ENST00000407019 TRAV8-1A0A0A6YYK1 113 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 TRBV6-1A0A0K0K1D8 114 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 NCBP2LA6PVI3 153 aaKnown RBP13.27□□□□□ -0.29
NUP50-203ENST00000407019 GNG7O60262 68 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 TOX4O94842 621 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 IGLC2P0DOY2 106 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms