RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CBR1P16152 277 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 RPL12P30050 165 aaKnown RBP2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 KRTAP10-3P60369 221 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 S100A10P60903 97 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 EIF5AP63241 154 aaKnown RBP2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 SMCO1Q147U7 214 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 RPL7L1Q6DKI1 246 aaKnown RBP2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 EIF5AL1Q6IS14 154 aaKnown RBP2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZNF880Q6PDB4 577 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 Q6ZT83 130 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 KRTAP11-1Q8IUC1 163 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 Q8IYB0 196 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZNF565Q8N9K5 539 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR11L1Q8NGX0 322 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 MRPL30Q8TCC3 161 aaKnown RBP2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 NEK7Q8TDX7 302 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 TMEM56Q96MV1 263 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 TP53RKQ96S44 253 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 RTL8AQ9BWD3 113 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR2J1Q9GZK6 312 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 TMEM222Q9H0R3 208 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR51B6Q9H340 312 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR2S2Q9NQN1 319 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 PRO0628Q9UI54 55 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 RFNGQ9Y644 331 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 TMEM56-RWDD3S4R434 201 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 SPTBN5Q9NRC6 3674 aaKnown RBP2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 COL27A1Q8IZC6 1860 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 CACNA1EQ15878 2313 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 SEC16AO15027 2179 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 TRIOBPQ9H2D6 2365 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 PIGBOS1A0A0B4J2F0 54 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 DUXBA0A1W2PPF3 345 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 TMEM218A2RU14 115 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 IQCF6A8MYZ5 107 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 GPR31O00270 319 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 UPK2O00526 184 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 CDIPTO14735 213 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 ENSAO43768 121 aaKnown RBP2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 PGLYRP1O75594 196 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 LYZL6O75951 148 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR2H2O95918 312 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 NPY1RP25929 384 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 PAX6P26367 422 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 SULT1A2P50226 295 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 IDH3GP51553 393 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 TMEM33P57088 247 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 ERVS71-1P61550 626 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 BTN1A1Q13410 526 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGFBP7Q16270 282 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 DEFB109BQ30KR1 87 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 FBXL19-AS1Q494R0 122 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 SPIN3Q5JUX0 258 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGFL3Q6UXB1 125 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 CLEC19AQ6UXS0 136 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZNF818PQ6ZRF7 136 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 H1FOOQ8IZA3 346 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 SELENOHQ8IZQ5 122 aaKnown RBP2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 GAPTQ8N292 157 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 ZNF645Q8N7E2 425 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 SLC35G3Q8N808 338 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 CNEP1R1Q8N9A8 125 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR5T1Q8NG75 326 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR8G5Q8NG78 346 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 OR10J5Q8NHC4 309 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 LHFPL5Q8TAF8 219 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 SLC25A40Q8TBP6 338 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 KLF14Q8TD94 323 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 C17orf50Q8WW18 174 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 ARL11Q969Q4 196 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 ABHD14BQ96IU4 210 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 SMIM8Q96KF7 97 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 LINC00167Q96N53 147 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 METTL26Q96S19 204 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 C11orf1Q9H5F2 150 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 TAF9BQ9HBM6 251 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 HES4Q9HCC6 221 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 ASF1BQ9NVP2 202 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 LSM5Q9Y4Y9 91 aaKnown RBP2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 ALPK2Q86TB3 2170 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 CABIN1Q9Y6J0 2220 aa2.95□□□□□ -1.94
HMGB3P18-201ENST00000406327 EXPH5Q8NEV8 1989 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 TECTAO75443 2155 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 BORCS7-ASMTA0A0B4J1R7 106 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 LOC105371267A0A1B0GV96 52 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 TMEM210A6NLX4 147 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 H0Y980 276 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 ATG12O94817 140 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 CYB5R3P00387 301 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 APOC3P02656 99 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 IL4P05112 153 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 SEC11BP0C7V7 166 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 CECR9P0C854 216 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 LINC00869P0C866 280 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 SLC25A6P12236 298 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 NQO2P16083 231 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 PVALBP20472 110 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 S100GP29377 79 aa2.94□□□□□ -1.94
HMGB3P18-201ENST00000406327 MPV17P39210 176 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms