RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 ERCC8Q13216 396 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 SP6Q3SY56 376 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 KHDC3LQ587J8 217 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 NXNL2Q5VZ03 156 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 UNQ9165/PRO28630Q6UXU0 137 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 HIST3H2BBQ8N257 126 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 STPG4Q8N801 248 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 OR4K13Q8NH42 304 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 NTN5Q8WTR8 489 aaPredicted RBP3.03□□□□□ -1.92
CLHC1-201ENST00000401408 SPANXDQ9BXN6 97 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 MRPL32Q9BYC8 188 aaKnown RBP3.03□□□□□ -1.92
CLHC1-201ENST00000401408 IMUPQ9GZP8 106 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 C11orf68Q9H3H3 251 aaKnown RBP3.03□□□□□ -1.92
CLHC1-201ENST00000401408 TUBA4BQ9H853 241 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 ASF1BQ9NVP2 202 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 FBXL12Q9NXK8 326 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 CCDC167Q9P0B6 97 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 XCL2Q9UBD3 114 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 IL36RNQ9UBH0 155 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 LINC00527Q9UJ94 153 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 HEBP2Q9Y5Z4 205 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 ENPP4Q9Y6X5 453 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 MYO7BQ6PIF6 2116 aa3.03□□□□□ -1.92
CLHC1-201ENST00000401408 LOC389332A0A1B0GUA5 103 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 ZNF705GA8MUZ8 300 aaPredicted RBP3.03□□□□□ -1.93
CLHC1-201ENST00000401408 C4orf51C9J302 202 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 ISLRO14498 428 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 KLF7O75840 302 aaPredicted RBP3.03□□□□□ -1.93
CLHC1-201ENST00000401408 TNFP01375 233 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 TRBV12-3P01733 135 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 FRMD6-AS1P0C7T7 363 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 ZFP36P26651 326 aaKnown RBP3.03□□□□□ -1.93
CLHC1-201ENST00000401408 FOXA3P55318 350 aaPredicted RBP3.03□□□□□ -1.93
CLHC1-201ENST00000401408 MP68P56378 58 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 RPS11P62280 158 aaKnown RBP eCLIP3.03□□□□□ -1.93
CLHC1-201ENST00000401408 RPS21P63220 83 aaKnown RBP3.03□□□□□ -1.93
CLHC1-201ENST00000401408 ELOCQ15369 112 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 C6orf99Q4VX62 202 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 MORN5Q5VZ52 161 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 RFLNAQ6ZTI6 216 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 WDR86Q86TI4 376 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 LINC00337Q8N6G1 96 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 ZIC4Q8N9L1 334 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 BRK1Q8WUW1 75 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 PSMF1Q92530 271 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 NEURL3Q96EH8 262 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 KCNS1Q96KK3 526 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 ERMAPQ96PL5 475 aaPredicted RBP3.03□□□□□ -1.93
CLHC1-201ENST00000401408 SELENOIQ9C0D9 397 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 DEFB127Q9H1M4 99 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 OCIAD1Q9NX40 245 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 DKK2Q9UBU2 259 aa3.03□□□□□ -1.93
CLHC1-201ENST00000401408 MARCOQ9UEW3 520 aaPredicted RBP3.03□□□□□ -1.93
CLHC1-201ENST00000401408 MDC1Q14676 2089 aaKnown RBP3.02□□□□□ -1.93
CLHC1-201ENST00000401408 AKAP6Q13023 2319 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 IGHV2-26A0A0B4J1V2 119 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 A0A0J9YXV3 536 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 IZUMO1RA6ND01 250 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 KRASP01116 189 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 TRGC2P03986 189 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 CECR9P0C854 216 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 OPRK1P41145 380 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 CDKN2AP42771 156 aaKnown RBP3.02□□□□□ -1.93
CLHC1-201ENST00000401408 NCBP2P52298 156 aaKnown RBP eCLIP3.02□□□□□ -1.931e-7■■■□□ 15
CLHC1-201ENST00000401408 PLGLB1Q02325 96 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 AKR1C1Q04828 323 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 MSMO1Q15800 293 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 DNM1P46Q6ZS02 220 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 C9orf40Q8IXQ3 194 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 C3orf22Q8N5N4 141 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 ZNF709Q8N972 641 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 RAB2BQ8WUD1 216 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 SLC25A46Q96AG3 418 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 CNRIP1Q96F85 164 aaPredicted RBP3.02□□□□□ -1.93
CLHC1-201ENST00000401408 SNRNP25Q9BV90 132 aaKnown RBP3.02□□□□□ -1.93
CLHC1-201ENST00000401408 DYSFO75923 2080 aa3.02□□□□□ -1.93
CLHC1-201ENST00000401408 IGHV1-69-2A0A0G2JMI3 117 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 SPTY2D1-AS1A0A0U1RR47 76 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 G3V3Q6 166 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 AGPAT2O15120 278 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 PSPHP1O15172 72 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 EGR2P11161 476 aaPredicted RBP3.01□□□□□ -1.93
CLHC1-201ENST00000401408 VDAC1P21796 283 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 GATA2P23769 480 aaPredicted RBP3.01□□□□□ -1.93
CLHC1-201ENST00000401408 PSMB8P28062 276 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 SDC2P34741 201 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 PSMB3P49720 205 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 INSL3P51460 131 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 KRTAP10-9P60411 292 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 CRADDP78560 199 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 KLRD1Q13241 179 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 C11orf71Q6IPW1 123 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 MRPL54Q6P161 138 aaKnown RBP3.01□□□□□ -1.93
CLHC1-201ENST00000401408 NR2C2APQ86WQ0 139 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 OR2T10Q8NGZ9 312 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 SGMS2Q8NHU3 365 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 TWIST2Q8WVJ9 160 aa3.01□□□□□ -1.93
CLHC1-201ENST00000401408 RTN4IP1Q8WWV3 396 aaPredicted RBP3.01□□□□□ -1.93
CLHC1-201ENST00000401408 GEMIN6Q8WXD5 167 aaKnown RBP3.01□□□□□ -1.93
CLHC1-201ENST00000401408 GNPNAT1Q96EK6 184 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms