RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PRSS22Q9GZN4 317 aa20.41■□□□□ 0.86
COL13A1-203ENST00000398969 SPTA1P02549 2419 aa20.4■□□□□ 0.86
COL13A1-203ENST00000398969 IGHV2-26A0A0B4J1V2 119 aa20.4■□□□□ 0.86
COL13A1-203ENST00000398969 H3BTX0 84 aa20.4■□□□□ 0.86
COL13A1-203ENST00000398969 PAX2Q02962 417 aa20.4■□□□□ 0.86
COL13A1-203ENST00000398969 KLRB1Q12918 225 aa20.4■□□□□ 0.86
COL13A1-203ENST00000398969 TNFRSF14Q92956 283 aa20.4■□□□□ 0.86
COL13A1-203ENST00000398969 Q9H3A6 140 aa20.4■□□□□ 0.86
COL13A1-203ENST00000398969 IGHV1-69-2A0A0G2JMI3 117 aa20.39■□□□□ 0.86
COL13A1-203ENST00000398969 FAM181BA6NEQ2 426 aa20.39■□□□□ 0.86
COL13A1-203ENST00000398969 DLEU1O43261 78 aa20.39■□□□□ 0.86
COL13A1-203ENST00000398969 TCRAP04437 139 aa20.39■□□□□ 0.86
COL13A1-203ENST00000398969 GSX1Q9H4S2 264 aaPredicted RBP20.39■□□□□ 0.86
COL13A1-203ENST00000398969 M0R2Z0 102 aa20.39■□□□□ 0.85
COL13A1-203ENST00000398969 IGLV1-47P01700 117 aa20.39■□□□□ 0.85
COL13A1-203ENST00000398969 LCN12Q6JVE5 192 aa20.39■□□□□ 0.85
COL13A1-203ENST00000398969 RNASEKQ6P5S7 137 aaKnown RBP20.39■□□□□ 0.85
COL13A1-203ENST00000398969 C19orf71A6NCJ1 209 aa20.38■□□□□ 0.85
COL13A1-203ENST00000398969 HBBP68871 147 aa20.38■□□□□ 0.85
COL13A1-203ENST00000398969 PRB3Q04118 309 aaPredicted RBP20.38■□□□□ 0.85
COL13A1-203ENST00000398969 MMDQ15546 238 aa20.38■□□□□ 0.85
COL13A1-203ENST00000398969 CT83Q5H943 113 aa20.38■□□□□ 0.85
COL13A1-203ENST00000398969 OR2D3Q8NGH3 330 aa20.38■□□□□ 0.85
COL13A1-203ENST00000398969 ZNF492Q9P255 531 aa20.38■□□□□ 0.85
COL13A1-203ENST00000398969 F11RQ9Y624 299 aaKnown RBP20.38■□□□□ 0.85
COL13A1-203ENST00000398969 POLEQ07864 2286 aa20.38■□□□□ 0.85
COL13A1-203ENST00000398969 TEX22C9J3V5 150 aa20.38■□□□□ 0.85
COL13A1-203ENST00000398969 ATOH7Q8N100 152 aa20.38■□□□□ 0.85
COL13A1-203ENST00000398969 GTSF1Q8WW33 167 aa20.38■□□□□ 0.85
COL13A1-203ENST00000398969 IGHV1-3A0A0C4DH29 117 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 A8MWL6 223 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 EBLN2Q6P2I7 272 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 INSIG2Q9Y5U4 225 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 P01737 135 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 GAGE1Q13065 139 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 PMCHL1Q16048 86 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 PRR31Q5SQ13 230 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 PPP1R27Q86WC6 154 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 TXN2Q99757 166 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 ZZEF1O43149 2961 aa20.37■□□□□ 0.85
COL13A1-203ENST00000398969 PKDREJQ9NTG1 2253 aa20.36■□□□□ 0.85
COL13A1-203ENST00000398969 COL5A1-AS1Q5SY13 56 aa20.36■□□□□ 0.85
COL13A1-203ENST00000398969 Q6ZN92 141 aa20.36■□□□□ 0.85
COL13A1-203ENST00000398969 KLHDC1Q8N7A1 406 aa20.36■□□□□ 0.85
COL13A1-203ENST00000398969 OR8B3Q8NGG8 313 aa20.36■□□□□ 0.85
COL13A1-203ENST00000398969 OR8B2Q96RD0 313 aa20.36■□□□□ 0.85
COL13A1-203ENST00000398969 RALYQ9UKM9 306 aaKnown RBP20.36■□□□□ 0.85
COL13A1-203ENST00000398969 HIGD1AQ9Y241 93 aa20.36■□□□□ 0.85
COL13A1-203ENST00000398969 URB1-AS1Q96HZ7 61 aa20.36■□□□□ 0.85
COL13A1-203ENST00000398969 NGBQ9NPG2 151 aa20.36■□□□□ 0.85
COL13A1-203ENST00000398969 BUB1B-PAK6H3BSN5 160 aa20.35■□□□□ 0.85
COL13A1-203ENST00000398969 MAJINQ3KP22 176 aa20.35■□□□□ 0.85
COL13A1-203ENST00000398969 PSG1P11464 419 aa20.34■□□□□ 0.85
COL13A1-203ENST00000398969 SOX21Q9Y651 276 aaPredicted RBP20.34■□□□□ 0.85
COL13A1-203ENST00000398969 IGLC1P0CG04 106 aa20.34■□□□□ 0.85
COL13A1-203ENST00000398969 BTF3P20290 206 aaKnown RBP20.34■□□□□ 0.85
COL13A1-203ENST00000398969 HNRNPA3P51991 378 aaKnown RBP20.34■□□□□ 0.85
COL13A1-203ENST00000398969 LYZP61626 148 aa20.34■□□□□ 0.85
COL13A1-203ENST00000398969 GOLT1BQ9Y3E0 138 aa20.34■□□□□ 0.85
COL13A1-203ENST00000398969 ADGRG4Q8IZF6 3080 aa20.34■□□□□ 0.85
COL13A1-203ENST00000398969 C2orf70A6NJV1 201 aa20.33■□□□□ 0.85
COL13A1-203ENST00000398969 TFPI2P48307 235 aa20.33■□□□□ 0.85
COL13A1-203ENST00000398969 PGLYRP4Q96LB8 373 aa20.33■□□□□ 0.85
COL13A1-203ENST00000398969 FBXL15Q9H469 300 aa20.33■□□□□ 0.85
COL13A1-203ENST00000398969 NPSP0C0P6 89 aa20.33■□□□□ 0.84
COL13A1-203ENST00000398969 RBM14Q96PK6 669 aaKnown RBP20.33■□□□□ 0.84
COL13A1-203ENST00000398969 GFRA4Q9GZZ7 299 aa20.33■□□□□ 0.84
COL13A1-203ENST00000398969 OTORQ9NRC9 128 aa20.33■□□□□ 0.84
COL13A1-203ENST00000398969 APOBEC3AP31941 199 aaPredicted RBP20.32■□□□□ 0.84
COL13A1-203ENST00000398969 Q56UQ5 140 aa20.32■□□□□ 0.84
COL13A1-203ENST00000398969 Q86TA4 180 aa20.32■□□□□ 0.84
COL13A1-203ENST00000398969 DAZAP1Q96EP5 407 aaKnown RBP20.32■□□□□ 0.84
COL13A1-203ENST00000398969 SRSF12Q8WXF0 261 aaKnown RBP20.32■□□□□ 0.84
COL13A1-203ENST00000398969 SLC25A39Q9BZJ4 359 aaPredicted RBP20.32■□□□□ 0.84
COL13A1-203ENST00000398969 TMEM14CQ9P0S9 112 aa20.32■□□□□ 0.84
COL13A1-203ENST00000398969 RBPMS2Q6ZRY4 209 aaKnown RBP20.31■□□□□ 0.84
COL13A1-203ENST00000398969 LAMTOR2Q9Y2Q5 125 aa20.31■□□□□ 0.84
COL13A1-203ENST00000398969 TRAV8-1A0A0A6YYK1 113 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 I3L2K1 104 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 FOXA3P55318 350 aaPredicted RBP20.3■□□□□ 0.84
COL13A1-203ENST00000398969 KIR3DL3Q8N743 410 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 MALRD1Q5VYJ5 2156 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 NCOR2Q9Y618 2525 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 TRAV9-2A0A087WT02 112 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 B9A039 149 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 NPIPB6E9PJ23 425 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 LYNX1G3V0Z9 82 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 LYNX1P0DP58 116 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 COX7A1P24310 79 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 CD24P25063 80 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 ATRXP46100 2492 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 CHD8Q9HCK8 2581 aa20.3■□□□□ 0.84
COL13A1-203ENST00000398969 STPG4Q8N801 248 aa20.29■□□□□ 0.84
COL13A1-203ENST00000398969 KALRNO60229 2985 aa20.29■□□□□ 0.84
COL13A1-203ENST00000398969 IGLV2-11P01706 119 aa20.29■□□□□ 0.84
COL13A1-203ENST00000398969 FAM120AOSQ5T036 256 aa20.29■□□□□ 0.84
COL13A1-203ENST00000398969 FAM162BQ5T6X4 162 aa20.29■□□□□ 0.84
COL13A1-203ENST00000398969 EXOC3-AS1Q8N2X6 119 aa20.29■□□□□ 0.84
COL13A1-203ENST00000398969 CIARTQ8N365 385 aaPredicted RBP20.29■□□□□ 0.84
COL13A1-203ENST00000398969 RPEQ96AT9 228 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms