RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 Q8IYB0 196 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 CLECL1Q8IZS7 167 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 OR2T10Q8NGZ9 312 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 ZNF418Q8TF45 676 aaPredicted RBP0.75□□□□□ -2.29
CD47-203ENST00000398258 GINS3Q9BRX5 216 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 PBDC1Q9BVG4 233 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 IMUPQ9GZP8 106 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 TMEM126AQ9H061 195 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 IL20Q9NYY1 176 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 SSR3Q9UNL2 185 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 MICAL3Q7RTP6 2002 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 ARHGEF28Q8N1W1 1705 aaKnown RBP0.75□□□□□ -2.29
CD47-203ENST00000398258 RIMBP3CA6NJZ7 1639 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 RIMBP3BA6NNM3 1639 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 RIMBP3Q9UFD9 1639 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 SMARCA2P51531 1590 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 LAMC3Q9Y6N6 1575 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 WDR7Q9Y4E6 1490 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 MIA2Q96PC5 1412 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 PCDH15Q96QU1 1955 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 DUXBA0A1W2PPF3 345 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 RIIAD1A6NNX1 92 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 E5RI56 91 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 TMEM256-PLSCR3K7ERE1 68 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 NDUFB3O43676 98 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 HYPMO75409 117 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 FABP1P07148 127 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 INSL3P51460 131 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 CRYBA4P53673 196 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 POU6F1Q14863 301 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 C1orf137Q5JT78 98 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 TRIQKQ629K1 86 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 C3orf33Q6P1S2 294 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 STX19Q8N4C7 294 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 OR2T35Q8NGX2 323 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 SFT2D1Q8WV19 159 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 YPEL2Q96QA6 119 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 PRRT1Q99946 306 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 SLC25A21Q9BQT8 299 aaPredicted RBP0.74□□□□□ -2.29
CD47-203ENST00000398258 C14orf132Q9NPU4 83 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 ACER3Q9NUN7 267 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 CFAP43Q8NDM7 1665 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 HEATR5BQ9P2D3 2071 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 SYNJ1O43426 1573 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 PLXND1Q9Y4D7 1925 aa0.74□□□□□ -2.29
CD47-203ENST00000398258 MED14O60244 1454 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 UHRF1BP1Q6BDS2 1440 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 KIF1BO60333 1816 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 ECM29Q5VYK3 1845 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 TECTAO75443 2155 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 A0A087WX48 190 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 TRGV10A0A0A0MS01 117 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 TRBV6-8A0A0A6YYG3 113 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 AIPO00170 330 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 TIMM17BO60830 172 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 PROSCO94903 275 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 CXCL1P09341 107 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 GLRXP35754 106 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 DYNLT3P51808 116 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 TMBIM6P55061 237 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 CNBPP62633 177 aaKnown RBP0.73□□□□□ -2.29
CD47-203ENST00000398258 UBE2BP63146 152 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 SCGB2B2Q4G0G5 96 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 EIF5AL1Q6IS14 154 aaKnown RBP0.73□□□□□ -2.29
CD47-203ENST00000398258 C22orf39Q6P5X5 142 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 STX12Q86Y82 276 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 LINC00301Q8NCQ3 95 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 TEX47Q8TBZ9 253 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 DYDC1Q8WWB3 177 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 ZHX1-C8orf76Q96EF9 292 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 TEX37Q96LM6 180 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 ZNF714Q96N38 554 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 LYSMD1Q96S90 227 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 LINC00467Q9BRT7 94 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 NPCDR1Q9BY65 106 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 OR2J1Q9GZK6 312 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 SH3BGRL3Q9H299 93 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 LYRM2Q9NU23 88 aaPredicted RBP0.73□□□□□ -2.29
CD47-203ENST00000398258 SNURFQ9Y675 71 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 CCDC88AQ3V6T2 1871 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 FANCAO15360 1455 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 ARAP1Q96P48 1450 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 IFT140Q96RY7 1462 aa0.73□□□□□ -2.29
CD47-203ENST00000398258 ARFGEF3Q5TH69 2177 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 ODAMA1E959 279 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 CCDC160A6NGH7 325 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 B4DSR2 109 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 GEMIN2O14893 280 aaKnown RBP0.72□□□□□ -2.29
CD47-203ENST00000398258 INE1O15225 51 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 CRHP06850 196 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 SERPINB1P30740 379 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 TCTAP57738 103 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 MSMO1Q15800 293 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 LTC4SQ16873 150 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 TEX261Q6UWH6 196 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 MED12LQ86YW9 2145 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 IFT20Q8IY31 132 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 FAM24BQ8N5W8 94 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 OR10K1Q8NGX5 313 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 OR4K15Q8NH41 348 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms