RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 SMCO3A2RU48 225 aa10.02□□□□□ -0.81
CXCL12-205ENST00000395794 DEFB4AO15263 64 aa10.02□□□□□ -0.81
CXCL12-205ENST00000395794 SSSCA1O60232 199 aa10.02□□□□□ -0.81
CXCL12-205ENST00000395794 MIFP14174 115 aa10.02□□□□□ -0.81
CXCL12-205ENST00000395794 NANOS2P60321 138 aaKnown RBP10.02□□□□□ -0.81
CXCL12-205ENST00000395794 LINC00476Q8WZB0 136 aa10.02□□□□□ -0.81
CXCL12-205ENST00000395794 TMEM147Q9BVK8 224 aa10.02□□□□□ -0.81
CXCL12-205ENST00000395794 TBC1D24Q9ULP9 559 aa10.02□□□□□ -0.81
CXCL12-205ENST00000395794 IGKV1OR2-108A0A075B7D4 117 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 H3BMM0 161 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 SCGB1D2O95969 90 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 GIG44P09565 113 aaPredicted RBP10.01□□□□□ -0.81
CXCL12-205ENST00000395794 ORM2P19652 201 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 C4BPBP20851 252 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 GALR1P47211 349 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 PSMB3P49720 205 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 IAH1Q2TAA2 248 aaPredicted RBP10.01□□□□□ -0.81
CXCL12-205ENST00000395794 ACOT7LQ6ZUV0 252 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 SMIM8Q96KF7 97 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 CLEC5AQ9NY25 188 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 GSKIPQ9P0R6 139 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 SLC45A2Q9UMX9 530 aa10.01□□□□□ -0.81
CXCL12-205ENST00000395794 PRSS46E5RG02 174 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 LYRM1O43325 122 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 IL5P05113 134 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 HLA-DRB4P13762 266 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 BTCP35070 178 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 MEOX2P50222 304 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 ZNF846Q147U1 533 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 EBLN2Q6P2I7 272 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 TMEM144Q7Z5S9 345 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 S100A7AQ86SG5 101 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 OR4D5Q8NGN0 318 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 OR1B1Q8NGR6 318 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 MITD1Q8WV92 249 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 C20orf85Q9H1P6 137 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 SLC25A22Q9H936 323 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 HLA-DRB4X5D2U9 266 aa10□□□□□ -0.81
CXCL12-205ENST00000395794 IGHV4-28A0A0C4DH34 117 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 ZNF705EA8MWA4 302 aaPredicted RBP9.99□□□□□ -0.81
CXCL12-205ENST00000395794 ISLRO14498 428 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 SPATA31B1PQ5VZV4 182 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 FOXI2Q6ZQN5 318 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 Q8NAQ8 132 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 OR10P1Q8NGE3 313 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 C16orf92Q96LL3 132 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 GPR82Q96P67 336 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 WDR12Q9GZL7 423 aaKnown RBP9.99□□□□□ -0.81
CXCL12-205ENST00000395794 HRH4Q9H3N8 390 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 XCL2Q9UBD3 114 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 MGAT4CQ9UBM8 478 aa9.99□□□□□ -0.81
CXCL12-205ENST00000395794 ZNF98A6NK75 572 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 C11orf94C9JXX5 98 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 GATA2P23769 480 aaPredicted RBP9.98□□□□□ -0.81
CXCL12-205ENST00000395794 TAS2R30P59541 319 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 RAP2BP61225 183 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 SELENOTP62341 195 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 CYP2G1PQ6ZSU1 146 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 ZBTB8BQ8NAP8 495 aaPredicted RBP9.98□□□□□ -0.81
CXCL12-205ENST00000395794 CSNK1G2-AS1Q8NCQ2 148 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 OR4B1Q8NGF8 309 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 C2CD4CQ8TF44 421 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 RSG1Q9BU20 258 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 CCDC32Q9BV29 185 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 SAV1Q9H4B6 383 aaPredicted RBP9.98□□□□□ -0.81
CXCL12-205ENST00000395794 NPVFQ9HCQ7 196 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 RPRMQ9NS64 109 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 DNAH1Q9P2D7 4330 aa9.98□□□□□ -0.81
CXCL12-205ENST00000395794 TRAV6A0A075B6T7 132 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 FAM25EA8MYX2 175 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 L7N2F9 121 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 PLA2G10O15496 165 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 TSC22D2O75157 780 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 HYPMO75409 117 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 TCRBP04435 133 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 METTL15P1P0C7V9 234 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 RBMY1A1P0DJD3 496 aaKnown RBP9.97□□□□□ -0.81
CXCL12-205ENST00000395794 RBMY1CP0DJD4 496 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 RRAS2P62070 204 aaPredicted RBP9.97□□□□□ -0.81
CXCL12-205ENST00000395794 VAMP2P63027 116 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 DLK1P80370 383 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 RBMY1FQ15415 496 aaKnown RBP9.97□□□□□ -0.81
CXCL12-205ENST00000395794 SLC25A32Q9H2D1 315 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 RNF24Q9Y225 148 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 X6R8D5 127 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 HYDINQ4G0P3 5121 aa9.97□□□□□ -0.81
CXCL12-205ENST00000395794 PLECQ15149 4684 aaKnown RBP9.97□□□□□ -0.81
CXCL12-205ENST00000395794 C5orf51A6NDU8 294 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 FNDC10F2Z333 226 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 SOCS3O14543 225 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 OR5G3P0C626 314 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 TCTAP57738 103 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 MZT2BQ6NZ67 158 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 TEPPQ6URK8 271 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 TMEM14EPQ6UXP3 125 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 NUDT15Q9NV35 164 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 DOK5Q9P104 306 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 HIGD1AQ9Y241 93 aa9.96□□□□□ -0.82
CXCL12-205ENST00000395794 ALMS1Q8TCU4 4167 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms