RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 POLR3KQ9Y2Y1 108 aaPredicted RBP6.65□□□□□ -1.35
TRPS1-203ENST00000395715 IGKV2-40A0A087WW87 121 aaPredicted RBP6.65□□□□□ -1.35
TRPS1-203ENST00000395715 IGHV1OR21-1A0A087WYE8 117 aa6.65□□□□□ -1.35
TRPS1-203ENST00000395715 IGKV2D-40P01614 121 aaPredicted RBP6.65□□□□□ -1.35
TRPS1-203ENST00000395715 KLF14Q8TD94 323 aaPredicted RBP6.65□□□□□ -1.35
TRPS1-203ENST00000395715 FOCADQ5VW36 1801 aa6.65□□□□□ -1.35
TRPS1-203ENST00000395715 C21orf140B9A014 251 aa6.65□□□□□ -1.35
TRPS1-203ENST00000395715 CTGFP29279 349 aa6.65□□□□□ -1.35
TRPS1-203ENST00000395715 PRSS57Q6UWY2 283 aa6.65□□□□□ -1.35
TRPS1-203ENST00000395715 LINC01551Q86U37 167 aa6.65□□□□□ -1.35
TRPS1-203ENST00000395715 CADP27708 2225 aa6.65□□□□□ -1.35
TRPS1-203ENST00000395715 RNF222A6NCQ9 220 aa6.65□□□□□ -1.35
TRPS1-203ENST00000395715 IGLC2P0DOY2 106 aa6.65□□□□□ -1.35
TRPS1-203ENST00000395715 IGLC3P0DOY3 106 aa6.65□□□□□ -1.35
TRPS1-203ENST00000395715 KLF5Q13887 457 aaPredicted RBP6.65□□□□□ -1.35
TRPS1-203ENST00000395715 CCL4P13236 92 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 POLEQ07864 2286 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 IGHV3-11P01762 117 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 CD55P08174 381 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 DEFB105AQ8NG35 78 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 PAPPA2Q9BXP8 1791 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 CEP250Q9BV73 2442 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 TJP1Q07157 1748 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 TMEM92Q6UXU6 159 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 TTTY12Q9BZ98 90 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 IGLV3-27P01718 113 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 HOXB3P14651 431 aaPredicted RBP6.64□□□□□ -1.35
TRPS1-203ENST00000395715 MPZP25189 248 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 PGFP49763 221 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 PILRAQ9UKJ1 303 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 IGHV5-10-1A0A0J9YXX1 117 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 C17orf98A8MV24 154 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 CDKN1AP38936 164 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 ZNF138P52744 262 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 CTSBP07858 339 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 DPM3Q9P2X0 92 aa6.64□□□□□ -1.35
TRPS1-203ENST00000395715 VDAC2P45880 294 aaPredicted RBP6.63□□□□□ -1.35
TRPS1-203ENST00000395715 CD200R1LQ6Q8B3 271 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 THADAQ6YHU6 1953 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 TRBV5-7A0A0A0MS05 114 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 PATE3B3GLJ2 98 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 HRKO00198 91 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 TMEM190Q8WZ59 177 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 RTBDNQ9BSG5 229 aaPredicted RBP6.63□□□□□ -1.35
TRPS1-203ENST00000395715 C15orf61A6NNL5 157 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 TEX22C9J3V5 150 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 IGHV3-53P01767 116 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 LIME1Q9H400 295 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 ARAP2Q8WZ64 1704 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 CRYGCP07315 174 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 SLC25A16P16260 332 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 PRR31Q5SQ13 230 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 C14orf178Q8N769 122 aaPredicted RBP6.63□□□□□ -1.35
TRPS1-203ENST00000395715 CLPSP04118 112 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 NDUFB1O75438 58 aa6.63□□□□□ -1.35
TRPS1-203ENST00000395715 NTN5Q8WTR8 489 aaPredicted RBP6.63□□□□□ -1.35
TRPS1-203ENST00000395715 IGHV4-28A0A0C4DH34 117 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 C8orf82Q6P1X6 216 aaPredicted RBP6.62□□□□□ -1.35
TRPS1-203ENST00000395715 SMKR1H3BMG3 65 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 BAALC-AS2P0C853 105 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 HLA-DRB4P13762 266 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 CRYBA2P53672 197 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 C18orf12Q96KH6 178 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 HLA-DRB4X5D2U9 266 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 IGFBP3P17936 291 aaPredicted RBP6.62□□□□□ -1.35
TRPS1-203ENST00000395715 ZIC4Q8N9L1 334 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 RETNQ9HD89 108 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 SRRM4A7MD48 611 aaKnown RBP6.62□□□□□ -1.35
TRPS1-203ENST00000395715 K7ERJ3 54 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 CGB7P0DN87 165 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 CDCP2Q5VXM1 449 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 TMEM141Q96I45 108 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 C20orf144Q9BQM9 153 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 PRR15LQ9BU68 103 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 EXOC3-AS1Q8N2X6 119 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 HERV-K104P63124 156 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 A0A0B4J2C4 111 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 PAX8Q06710 450 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 RNF126Q9BV68 326 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 PMS2P5A8MQ11 134 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 EFEMP2O95967 443 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 BVES-AS1Q5T3Y7 98 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 RNF115Q9Y4L5 304 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 LHFPL6Q9Y693 200 aa6.62□□□□□ -1.35
TRPS1-203ENST00000395715 SH2D1AO60880 128 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 CGB3P0DN86 165 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 RGPD3A6NKT7 1758 aaPredicted RBP6.61□□□□□ -1.35
TRPS1-203ENST00000395715 ABCA3Q99758 1704 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 IGHV1OR15-1A0A075B7D0 117 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 ACP7Q6ZNF0 438 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 C1QTNF5Q9BXJ0 243 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 IGLV3-16A0A075B6K0 115 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 IGKV3D-7A0A0C4DH55 119 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 COX8AP10176 69 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 CRYGNQ8WXF5 182 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 TP53TG1Q9Y2A0 90 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 NBR2O15453 112 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 ID3Q02535 119 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 USP54Q70EL1 1684 aa6.61□□□□□ -1.35
TRPS1-203ENST00000395715 TMEM14DPA8MWL7 114 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms