RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 LURAP1LQ8IV03 231 aa15.07■□□□□ 0
LMNB1-202ENST00000395354 OR5AU1Q8NGC0 362 aa15.07■□□□□ 0
LMNB1-202ENST00000395354 UHRF2Q96PU4 802 aa15.07■□□□□ 0
LMNB1-202ENST00000395354 NF1P21359 2839 aa15.06■□□□□ 0
LMNB1-202ENST00000395354 TRBV9A0A0B4J1U6 114 aa15.06■□□□□ 0
LMNB1-202ENST00000395354 A0A1W2PRE2 83 aa15.06■□□□□ 0
LMNB1-202ENST00000395354 GNG7O60262 68 aa15.06■□□□□ 0
LMNB1-202ENST00000395354 NDUFB8O95169 186 aa15.06■□□□□ 0
LMNB1-202ENST00000395354 MORN5Q5VZ52 161 aa15.06■□□□□ 0
LMNB1-202ENST00000395354 RPUSD4Q96CM3 377 aaKnown RBP15.06■□□□□ 0
LMNB1-202ENST00000395354 OR51M1Q9H341 326 aa15.06■□□□□ 0
LMNB1-202ENST00000395354 FBXL7Q9UJT9 491 aa15.06■□□□□ 0
LMNB1-202ENST00000395354 CUBNO60494 3623 aa15.05■□□□□ -0
LMNB1-202ENST00000395354 TRAV5A0A0B4J249 113 aa15.05■□□□□ -0
LMNB1-202ENST00000395354 FAM181BA6NEQ2 426 aa15.05■□□□□ -0
LMNB1-202ENST00000395354 OR2J3O76001 311 aa15.05■□□□□ -0
LMNB1-202ENST00000395354 NPPCP23582 126 aa15.05■□□□□ -0
LMNB1-202ENST00000395354 ECSCRQ19T08 205 aa15.05■□□□□ -0
LMNB1-202ENST00000395354 C11orf52Q96A22 123 aa15.05■□□□□ -0
LMNB1-202ENST00000395354 PAXXQ9BUH6 204 aa15.05■□□□□ -0
LMNB1-202ENST00000395354 HIGD1AQ9Y241 93 aa15.05■□□□□ -0
LMNB1-202ENST00000395354 BLCAPP62952 87 aa15.04■□□□□ -0
LMNB1-202ENST00000395354 UBE2L3P68036 154 aaKnown RBP15.04■□□□□ -0
LMNB1-202ENST00000395354 ZNF674Q2M3X9 581 aa15.04■□□□□ -0
LMNB1-202ENST00000395354 C19orf54Q5BKX5 351 aa15.04■□□□□ -0
LMNB1-202ENST00000395354 S100A7AQ86SG5 101 aa15.04■□□□□ -0
LMNB1-202ENST00000395354 MRPL27Q9P0M9 148 aaKnown RBP15.04■□□□□ -0
LMNB1-202ENST00000395354 PRELID1Q9Y255 219 aa15.04■□□□□ -0
LMNB1-202ENST00000395354 TMA7Q9Y2S6 64 aaKnown RBP15.04■□□□□ -0
LMNB1-202ENST00000395354 C2CD3Q4AC94 2353 aa15.04■□□□□ -0
LMNB1-202ENST00000395354 F8W735 103 aaPredicted RBP15.03■□□□□ -0
LMNB1-202ENST00000395354 TSPAN4O14817 238 aa15.03■□□□□ -0
LMNB1-202ENST00000395354 IGF1P05019 195 aa15.03■□□□□ -0
LMNB1-202ENST00000395354 SRSF2Q01130 221 aaKnown RBP15.03■□□□□ -0
LMNB1-202ENST00000395354 Q56UQ5 140 aa15.03■□□□□ -0
LMNB1-202ENST00000395354 C15orf54Q8N8G6 183 aa15.03■□□□□ -0
LMNB1-202ENST00000395354 NECAP1Q8NC96 275 aa15.03■□□□□ -0
LMNB1-202ENST00000395354 GAR1Q9NY12 217 aaKnown RBP15.03■□□□□ -0
LMNB1-202ENST00000395354 TRAV41A0A0B4J266 112 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 WI2-2373I1.2A0A1W2PRP0 233 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 SH2D7A6NKC9 451 aaPredicted RBP15.02■□□□□ -0
LMNB1-202ENST00000395354 LINC01548A6NM66 108 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 OR2C1O95371 312 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 BRI3O95415 125 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 IGHG2P01859 326 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 CRYBA1P05813 215 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 AKR1C3P42330 323 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 LYZP61626 148 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 KIAA0141Q14154 515 aaPredicted RBP15.02■□□□□ -0
LMNB1-202ENST00000395354 Q8WTZ3 238 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 ATP6V0BQ99437 205 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 NPFFR1Q9GZQ6 430 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 TMEM242Q9NWH2 141 aa15.02■□□□□ -0
LMNB1-202ENST00000395354 CXorf65A6NEN9 183 aa15.02□□□□□ -0.01
LMNB1-202ENST00000395354 NDUFB4O95168 129 aa15.02□□□□□ -0.01
LMNB1-202ENST00000395354 OR10J4P0C629 311 aa15.02□□□□□ -0.01
LMNB1-202ENST00000395354 ZNF491Q8N8L2 437 aa15.02□□□□□ -0.01
LMNB1-202ENST00000395354 FXYD5Q96DB9 178 aa15.02□□□□□ -0.01
LMNB1-202ENST00000395354 G3V318 75 aa15.01□□□□□ -0.01
LMNB1-202ENST00000395354 RPL15P61313 204 aaKnown RBP15.01□□□□□ -0.01
LMNB1-202ENST00000395354 RHOGP84095 191 aa15.01□□□□□ -0.01
LMNB1-202ENST00000395354 ZNF502Q8TBZ5 544 aa15.01□□□□□ -0.01
LMNB1-202ENST00000395354 TCEAL7Q9BRU2 100 aa15.01□□□□□ -0.01
LMNB1-202ENST00000395354 TMEM14CQ9P0S9 112 aa15.01□□□□□ -0.01
LMNB1-202ENST00000395354 SCO2A0A1W2PP80 73 aa15□□□□□ -0.01
LMNB1-202ENST00000395354 RPL23P62829 140 aaKnown RBP15□□□□□ -0.01
LMNB1-202ENST00000395354 C9orf152Q5JTZ5 239 aa15□□□□□ -0.01
LMNB1-202ENST00000395354 RNF125Q96EQ8 232 aa15□□□□□ -0.01
LMNB1-202ENST00000395354 SLC25A39Q9BZJ4 359 aaPredicted RBP15□□□□□ -0.01
LMNB1-202ENST00000395354 PRSS22Q9GZN4 317 aa15□□□□□ -0.01
LMNB1-202ENST00000395354 CTDSP1Q9GZU7 261 aa15□□□□□ -0.01
LMNB1-202ENST00000395354 ZNF580Q9UK33 172 aa15□□□□□ -0.01
LMNB1-202ENST00000395354 FAM223BA6NKX1 122 aa14.99□□□□□ -0.01
LMNB1-202ENST00000395354 COLCA2A8K830 154 aa14.99□□□□□ -0.01
LMNB1-202ENST00000395354 H3BUA1 57 aa14.99□□□□□ -0.01
LMNB1-202ENST00000395354 PYYP10082 97 aa14.99□□□□□ -0.01
LMNB1-202ENST00000395354 C15orf32Q32M92 178 aa14.99□□□□□ -0.01
LMNB1-202ENST00000395354 Q6ZS46 218 aa14.99□□□□□ -0.01
LMNB1-202ENST00000395354 FAM223AQ8IWN6 122 aa14.99□□□□□ -0.01
LMNB1-202ENST00000395354 TMEM190Q8WZ59 177 aa14.99□□□□□ -0.01
LMNB1-202ENST00000395354 SHANK2-AS3Q9BTD1 123 aa14.99□□□□□ -0.01
LMNB1-202ENST00000395354 TRBV7-1A0A0A6YYK4 115 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 GGTLC3B5MD39 225 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 H3BRN7 92 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 CTSGP08311 255 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 GP9P14770 177 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 ZNF343Q6P1L6 599 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 EEF1AKMT3Q96AZ1 226 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 RNF24Q9Y225 148 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 S4R3C0 116 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 ATRQ13535 2644 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 MT-ND4LP03901 98 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 IL4P05112 153 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 S100A7P31151 101 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 ADIRFQ15847 76 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 PRIMA1Q86XR5 153 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 LY96Q9Y6Y9 160 aa14.98□□□□□ -0.01
LMNB1-202ENST00000395354 C9JCJ5 164 aa14.97□□□□□ -0.01
LMNB1-202ENST00000395354 NBEAP1P0C6P0 100 aa14.97□□□□□ -0.01
LMNB1-202ENST00000395354 SUMO1P63165 101 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms