RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 DDB2Q92466 427 aa12.82□□□□□ -0.36
SPOCK1-202ENST00000394945 CDX4O14627 284 aaPredicted RBP12.82□□□□□ -0.36
SPOCK1-202ENST00000394945 SSBP2P81877 361 aaPredicted RBP12.82□□□□□ -0.36
SPOCK1-202ENST00000394945 EXOC3-AS1Q8N2X6 119 aa12.82□□□□□ -0.36
SPOCK1-202ENST00000394945 IMMP1LQ96LU5 166 aa12.82□□□□□ -0.36
SPOCK1-202ENST00000394945 CHD3Q12873 2000 aaKnown RBP12.82□□□□□ -0.36
SPOCK1-202ENST00000394945 PLAURQ03405 335 aa12.82□□□□□ -0.36
SPOCK1-202ENST00000394945 C8orf46Q8TAG6 207 aa12.82□□□□□ -0.36
SPOCK1-202ENST00000394945 RNASE8Q8TDE3 154 aaKnown RBP12.82□□□□□ -0.36
SPOCK1-202ENST00000394945 LIME1Q9H400 295 aa12.82□□□□□ -0.36
SPOCK1-202ENST00000394945 CCL3L1P16619 93 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 ZNF114Q8NC26 417 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 ATP6V0BQ99437 205 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 LINC00312Q9Y6C7 94 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 IGLV3-12A0A075B6K2 115 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 TRBV6-6A0A0A6YYG2 114 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 TMEM238C9JI98 176 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 IGKV1D-33P01593 117 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 IGKV1-33P01594 117 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 LINC00473A8K010 186 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 UBE2L6O14933 153 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 PLNP26678 52 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 C10orf55Q5SWW7 151 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 DOCK7Q96N67 2140 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 F2Z2F3 143 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 SAP25Q8TEE9 199 aa12.81□□□□□ -0.36
SPOCK1-202ENST00000394945 K7EP34 96 aa12.8□□□□□ -0.36
SPOCK1-202ENST00000394945 IGKV3-20P01619 116 aa12.8□□□□□ -0.36
SPOCK1-202ENST00000394945 PVRIGQ6DKI7 326 aa12.8□□□□□ -0.36
SPOCK1-202ENST00000394945 LINC00205P59089 165 aa12.8□□□□□ -0.36
SPOCK1-202ENST00000394945 ATP5G2Q06055 141 aa12.8□□□□□ -0.36
SPOCK1-202ENST00000394945 LAGE3Q14657 143 aa12.8□□□□□ -0.36
SPOCK1-202ENST00000394945 EEF1AKMT3Q96AZ1 226 aa12.8□□□□□ -0.36
SPOCK1-202ENST00000394945 SPAG8Q99932 426 aaPredicted RBP12.8□□□□□ -0.36
SPOCK1-202ENST00000394945 IFI27P40305 119 aaPredicted RBP12.8□□□□□ -0.36
SPOCK1-202ENST00000394945 ANK1P16157 1881 aa12.8□□□□□ -0.36
SPOCK1-202ENST00000394945 PMS2P5A8MQ11 134 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 H7C1H1 209 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 TNFRSF14Q92956 283 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 AZU1P20160 251 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 SLAQ13239 276 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 SRSF6Q13247 344 aaKnown RBP12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 BVES-AS1Q5T3Y7 98 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 VWCEQ96DN2 955 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 MOB4Q9Y3A3 225 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 SCN5AQ14524 2016 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 GAGE12HA6NDE8 117 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 ASCL4Q6XD76 172 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 C20orf204Q6ZNR8 217 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 C1orf122Q6ZSJ8 110 aa12.79□□□□□ -0.36
SPOCK1-202ENST00000394945 IGKV1-6A0A0C4DH72 117 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 SPAARA0A1B0GVQ0 90 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 FOXG1P55316 489 aaPredicted RBP12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 ARTNQ5T4W7 220 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 DYNLRB2Q8TF09 96 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 DPM3Q9P2X0 92 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 TNFRSF18Q9Y5U5 241 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 SBF1O95248 1867 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 IGKV3OR2-268A0A0C4DH90 116 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 IGHV1-2P23083 117 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 PPP1R27Q86WC6 154 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 AMN1Q8IY45 258 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 V9GYV3 84 aa12.78□□□□□ -0.36
SPOCK1-202ENST00000394945 COX8AP10176 69 aa12.77□□□□□ -0.36
SPOCK1-202ENST00000394945 TRBV7-9A0A0J9YWB2 115 aa12.77□□□□□ -0.36
SPOCK1-202ENST00000394945 E9PLN8 166 aa12.77□□□□□ -0.36
SPOCK1-202ENST00000394945 FAM106AQ4KMX7 169 aa12.77□□□□□ -0.36
SPOCK1-202ENST00000394945 COL6A6A6NMZ7 2263 aa12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 ATXN8Q156A1 80 aa12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 LCNL1Q6ZST4 164 aa12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 HAPLN4Q86UW8 402 aa12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 TMEM158Q8WZ71 300 aa12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 IGHV2-70DA0A0C4DH43 119 aa12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 WIPF3A6NGB9 483 aa12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 NPFFO15130 113 aa12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 MYOD1P15172 320 aa12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 MRPL14Q6P1L8 145 aaKnown RBP12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 ARPC1AQ92747 370 aa12.77□□□□□ -0.37
SPOCK1-202ENST00000394945 MYLKQ15746 1914 aa12.76□□□□□ -0.37
SPOCK1-202ENST00000394945 RCHY1Q96PM5 261 aa12.76□□□□□ -0.37
SPOCK1-202ENST00000394945 PYGO2Q9BRQ0 406 aa12.76□□□□□ -0.37
SPOCK1-202ENST00000394945 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
SPOCK1-202ENST00000394945 NKX2-8O15522 239 aa12.76□□□□□ -0.37
SPOCK1-202ENST00000394945 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
SPOCK1-202ENST00000394945 IGLC7A0M8Q6 106 aa12.76□□□□□ -0.37
SPOCK1-202ENST00000394945 CLPSP04118 112 aa12.76□□□□□ -0.37
SPOCK1-202ENST00000394945 TDRG1Q3Y452 100 aa12.76□□□□□ -0.37
SPOCK1-202ENST00000394945 C2orf82Q6UX34 121 aa12.76□□□□□ -0.37
SPOCK1-202ENST00000394945 SMKR1H3BMG3 65 aa12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 SPACA3Q8IXA5 215 aa12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 ZNF48Q96MX3 618 aaPredicted RBP12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 CITED1Q99966 193 aa12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 RLFQ13129 1914 aa12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 IGHV3OR16-12A0A075B7B8 117 aa12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 F8W1H4 67 aa12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 ARMS2P0C7Q2 107 aa12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 MLANAQ16655 118 aa12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 MRPS18CQ9Y3D5 142 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms