RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 OR1S1Q8NH92 325 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 ATP6V0E2Q8NHE4 81 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 RNASEH2CQ8TDP1 164 aaKnown RBP-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 SFT2D1Q8WV19 159 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM54Q969K7 222 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 FAHD2AQ96GK7 314 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 PHB2Q99623 299 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 HSD17B10Q99714 261 aaKnown RBP-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 SLC25A2Q9BXI2 301 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 GABARAPL3Q9BY60 117 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 UCK2Q9BZX2 261 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR10A4Q9H209 315 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 GAL3ST2Q9H3Q3 398 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 RIBC2Q9H4K1 309 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 ELOVL3Q9HB03 270 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 MRPL40Q9NQ50 206 aaKnown RBP-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 RMND1Q9NWS8 449 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 IL36GQ9NZH8 169 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 MRTO4Q9UKD2 239 aaKnown RBP-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 NOL7Q9UMY1 257 aaKnown RBP-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 ASB4Q9Y574 426 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 HEY1Q9Y5J3 304 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 N6AMT1Q9Y5N5 214 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 ZNF706Q9Y5V0 76 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 ALS2Q96Q42 1657 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 CD109Q6YHK3 1445 aa-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 RRBP1Q9P2E9 1410 aaKnown RBP-2.1□□□□□ -2.75
RNU6-540P-201ENST00000384622 ERICH3Q5RHP9 1530 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 FAM135AQ9P2D6 1515 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 KIF16BQ96L93 1317 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 NLRP1Q9C000 1473 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 A0A0D9SEW6 157 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 A0A1B0GW64 132 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 A6NED7 52 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR5H1A6NKK0 313 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 OOSP1A8MZH6 123 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 CENPBD1B2RD01 187 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 SUPT3HB4E1H0 165 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 E7EUB6 86 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 E9PMD0 336 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 H0Y8G0 127 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 H3BMM0 161 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 K7ERS5 55 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 ZNF701M0R085 212 aaPredicted RBP-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 PLIN3O60664 434 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 ZMPSTE24O75844 475 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 PMP2P02689 132 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 MT-ND3P03897 115 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 CSF3P09919 207 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR5AC1P0C628 307 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 CD79AP11912 226 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 ANXA8P13928 327 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 DTYMKP23919 212 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 CRABP1P29762 137 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 ATP5DP30049 168 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 MAT2AP31153 395 aaKnown RBP-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 RGS6P49758 472 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 ARF6P62330 175 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 CRADDP78560 199 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 XRCC4Q13426 336 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 GNA13Q14344 377 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 BCL2A1Q16548 175 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 RRN3P1Q2M238 152 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 KCTD21Q4G0X4 260 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 ANXA8L1Q5VT79 327 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 PM20D1Q6GTS8 502 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 Q6JHZ5 121 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 CBLN3Q6UW01 205 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 RBM43Q6ZSC3 357 aaKnown RBP-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 HDDC2Q7Z4H3 204 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 TAC4Q86UU9 113 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 MUSTN1Q8IVN3 82 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 ATP6V0D2Q8N8Y2 350 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 STXBP6Q8NFX7 210 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR56B2PQ8NGI1 322 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR51Q1Q8NH59 317 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 AGR3Q8TD06 166 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 MGARPQ8TDB4 240 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 NEK7Q8TDX7 302 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 MITD1Q8WV92 249 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM141Q96I45 108 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 RMDN2Q96LZ7 410 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 CCDC43Q96MW1 224 aaKnown RBP-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR52E6Q96RD3 313 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 MRPL45Q9BRJ2 306 aaKnown RBP-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM246Q9BRR3 403 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 RSG1Q9BU20 258 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 SLC22A4Q9H015 551 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 FAM107BQ9H098 131 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 RAB1BQ9H0U4 201 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 AGPAT3Q9NRZ7 376 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 IMP3Q9NV31 184 aaKnown RBP-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 GIN1Q9NXP7 522 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 PSENENQ9NZ42 101 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 BAIAP2Q9UQB8 552 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 RASD1Q9Y272 281 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 PKIGQ9Y2B9 76 aa-2.11□□□□□ -2.75
RNU6-540P-201ENST00000384622 EHBP1L1Q8N3D4 1523 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 hCG_1818297A0A087WSY0 165 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 A0A1B0GXF2 115 aa-2.12□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms