RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ZNF266Q14584 549 aa11.67□□□□□ -0.54
PDGFB-202ENST00000381551 ZNF345Q14585 488 aa11.67□□□□□ -0.54
PDGFB-202ENST00000381551 KPRPQ5T749 579 aaPredicted RBP11.67□□□□□ -0.54
PDGFB-202ENST00000381551 PXDC1Q5TGL8 231 aa11.67□□□□□ -0.54
PDGFB-202ENST00000381551 PATE2Q6UY27 113 aa11.67□□□□□ -0.54
PDGFB-202ENST00000381551 KCNRGQ8N5I3 272 aa11.67□□□□□ -0.54
PDGFB-202ENST00000381551 OR1B1Q8NGR6 318 aa11.67□□□□□ -0.54
PDGFB-202ENST00000381551 OR2K2Q8NGT1 345 aa11.67□□□□□ -0.54
PDGFB-202ENST00000381551 RNF2Q99496 336 aa11.67□□□□□ -0.54
PDGFB-202ENST00000381551 ARL6Q9H0F7 186 aa11.67□□□□□ -0.54
PDGFB-202ENST00000381551 A0A0D9SG52 128 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 IZUMO1RA6ND01 250 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 TAAR5O14804 337 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 KRTAP10-11P60412 298 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 BEAN1Q3B7T3 259 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 FAM90A2PQ658T7 463 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 Q6ZRG5 221 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 ZNF709Q8N972 641 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 TMEM37Q8WXS4 190 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 NARS2Q96I59 477 aaKnown RBP11.66□□□□□ -0.54
PDGFB-202ENST00000381551 HYLS1Q96M11 299 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 SLC39A9Q9NUM3 307 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 PFDN2Q9UHV9 154 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 PXMP4Q9Y6I8 212 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 DNAH3Q8TD57 4116 aa11.66□□□□□ -0.54
PDGFB-202ENST00000381551 ZNF785A8K8V0 405 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 C17orf112F2Z3M2 114 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 OR5G3P0C626 314 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 BMI1P35226 326 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 B2MP61769 119 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 RPL7L1Q6DKI1 246 aaKnown RBP11.65□□□□□ -0.54
PDGFB-202ENST00000381551 C16orf54Q6UWD8 224 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 TMEM61Q8N0U2 210 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 GRAMD2BQ96HH9 432 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 RSG1Q9BU20 258 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 TMEM231Q9H6L2 316 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 DNAJC4Q9NNZ3 241 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 CYTL1Q9NRR1 136 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 DOK5Q9P104 306 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 ZMAT5Q9UDW3 170 aaKnown RBP11.65□□□□□ -0.54
PDGFB-202ENST00000381551 HIGD1AQ9Y241 93 aa11.65□□□□□ -0.54
PDGFB-202ENST00000381551 NOTCH1P46531 2555 aa11.64□□□□□ -0.55
PDGFB-202ENST00000381551 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
PDGFB-202ENST00000381551 LGALSLQ3ZCW2 172 aaPredicted RBP11.64□□□□□ -0.55
PDGFB-202ENST00000381551 C1orf194Q5T5A4 169 aa11.64□□□□□ -0.55
PDGFB-202ENST00000381551 LAMTOR1Q6IAA8 161 aa11.64□□□□□ -0.55
PDGFB-202ENST00000381551 RBPMS2Q6ZRY4 209 aaKnown RBP11.64□□□□□ -0.55
PDGFB-202ENST00000381551 ARV1Q9H2C2 271 aa11.64□□□□□ -0.55
PDGFB-202ENST00000381551 ELOA3CA0A087WX78 387 aaPredicted RBP11.63□□□□□ -0.55
PDGFB-202ENST00000381551 BORCS7-ASMTA0A0B4J1R7 106 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 ZNF98A6NK75 572 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 JTBO76095 146 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 CD5P06127 495 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 S100A7P31151 101 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 LCN12Q6JVE5 192 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 TMUB2Q71RG4 321 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 TCF24Q7RTU0 167 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 GLMPQ8WWB7 406 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 PPP1R14BQ96C90 147 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 UHRF2Q96PU4 802 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 ARPC5LQ9BPX5 153 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 SHANK2-AS3Q9BTD1 123 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 SLC25A39Q9BZJ4 359 aaPredicted RBP11.63□□□□□ -0.55
PDGFB-202ENST00000381551 KCNIP2Q9NS61 270 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 ZNF256Q9Y2P7 627 aaPredicted RBP11.63□□□□□ -0.55
PDGFB-202ENST00000381551 TIMM9Q9Y5J7 89 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 RFNGQ9Y644 331 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 SORL1Q92673 2214 aa11.63□□□□□ -0.55
PDGFB-202ENST00000381551 TSPAN4O14817 238 aa11.62□□□□□ -0.55
PDGFB-202ENST00000381551 COX7A2P2O60397 106 aa11.62□□□□□ -0.55
PDGFB-202ENST00000381551 ZFP69Q49AA0 526 aa11.62□□□□□ -0.55
PDGFB-202ENST00000381551 GCSAMLQ5JQS6 135 aa11.62□□□□□ -0.55
PDGFB-202ENST00000381551 C10orf113Q5VZT2 155 aa11.62□□□□□ -0.55
PDGFB-202ENST00000381551 LINC00305Q7Z4B0 112 aa11.62□□□□□ -0.55
PDGFB-202ENST00000381551 HSD17B11Q8NBQ5 300 aa11.62□□□□□ -0.55
PDGFB-202ENST00000381551 OR1L4Q8NGR5 311 aa11.62□□□□□ -0.55
PDGFB-202ENST00000381551 GATAD1Q8WUU5 269 aa11.62□□□□□ -0.55
PDGFB-202ENST00000381551 PFDN5Q99471 154 aa11.62□□□□□ -0.55
PDGFB-202ENST00000381551 HELTA6NFD8 242 aa11.61□□□□□ -0.55
PDGFB-202ENST00000381551 H3BRN7 92 aa11.61□□□□□ -0.55
PDGFB-202ENST00000381551 GP9P14770 177 aa11.61□□□□□ -0.55
PDGFB-202ENST00000381551 ATP6V0CP27449 155 aa11.61□□□□□ -0.55
PDGFB-202ENST00000381551 RPL11P62913 178 aaKnown RBP11.61□□□□□ -0.55
PDGFB-202ENST00000381551 GUCA2BQ16661 112 aa11.61□□□□□ -0.55
PDGFB-202ENST00000381551 S100A7AQ86SG5 101 aa11.61□□□□□ -0.55
PDGFB-202ENST00000381551 OR8I2Q8N0Y5 310 aa11.61□□□□□ -0.55
PDGFB-202ENST00000381551 PSMG3Q9BT73 122 aaPredicted RBP11.61□□□□□ -0.55
PDGFB-202ENST00000381551 SCRT1Q9BWW7 348 aa11.61□□□□□ -0.55
PDGFB-202ENST00000381551 KANTRA0A1W2PQU2 76 aa11.6□□□□□ -0.55
PDGFB-202ENST00000381551 BCL2L11O43521 198 aa11.6□□□□□ -0.55
PDGFB-202ENST00000381551 FFAR4Q5NUL3 377 aa11.6□□□□□ -0.55
PDGFB-202ENST00000381551 LEMD1Q68G75 181 aa11.6□□□□□ -0.55
PDGFB-202ENST00000381551 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
PDGFB-202ENST00000381551 GNPNAT1Q96EK6 184 aaPredicted RBP11.6□□□□□ -0.55
PDGFB-202ENST00000381551 SPAG8Q99932 426 aaPredicted RBP11.6□□□□□ -0.55
PDGFB-202ENST00000381551 SLC25A22Q9H936 323 aa11.6□□□□□ -0.55
PDGFB-202ENST00000381551 PFDN1O60925 122 aa11.59□□□□□ -0.55
PDGFB-202ENST00000381551 SERF2P84101 59 aa11.59□□□□□ -0.55
PDGFB-202ENST00000381551 MORN5Q5VZ52 161 aa11.59□□□□□ -0.55
PDGFB-202ENST00000381551 GBGT1Q8N5D6 347 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms