RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 BCL2P10415 239 aa18.98■□□□□ 0.63
ECHDC3-201ENST00000379215 TOR2AQ5JU69 321 aa18.98■□□□□ 0.63
ECHDC3-201ENST00000379215 LCNL1Q6ZST4 164 aa18.98■□□□□ 0.63
ECHDC3-201ENST00000379215 SLC25A39Q9BZJ4 359 aaPredicted RBP18.98■□□□□ 0.63
ECHDC3-201ENST00000379215 PEF1Q9UBV8 284 aaKnown RBP18.98■□□□□ 0.63
ECHDC3-201ENST00000379215 RABAC1Q9UI14 185 aa18.98■□□□□ 0.63
ECHDC3-201ENST00000379215 MTORP42345 2549 aa18.98■□□□□ 0.63
ECHDC3-201ENST00000379215 EIF3GO75821 320 aaKnown RBP eCLIP18.97■□□□□ 0.63
ECHDC3-201ENST00000379215 RPLP1P05386 114 aaKnown RBP18.97■□□□□ 0.63
ECHDC3-201ENST00000379215 GCHFRP30047 84 aa18.97■□□□□ 0.63
ECHDC3-201ENST00000379215 KIAA0141Q14154 515 aaPredicted RBP18.97■□□□□ 0.63
ECHDC3-201ENST00000379215 C10orf99Q6UWK7 81 aa18.97■□□□□ 0.63
ECHDC3-201ENST00000379215 OR5AU1Q8NGC0 362 aa18.97■□□□□ 0.63
ECHDC3-201ENST00000379215 SLC25A2Q9BXI2 301 aa18.97■□□□□ 0.63
ECHDC3-201ENST00000379215 GGCTO75223 188 aaKnown RBP18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 CD5P06127 495 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 USF2Q15853 346 aaPredicted RBP18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 ZNF506Q5JVG8 444 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 TOMM20LQ6UXN7 152 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 OR4F5Q8NH21 305 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 SHANK2-AS3Q9BTD1 123 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 TREM1Q9NP99 234 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 ARL2-SNX15V9GYD0 113 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 PPP5D1E7EU14 171 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 H3BRN7 92 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 NDUFA4O00483 81 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 LGALS1P09382 135 aaKnown RBP18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 WFDC12Q8WWY7 111 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 FAM167A-AS1Q96KT0 104 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 ZFAND3Q9H8U3 227 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 VAX2Q9UIW0 290 aa18.96■□□□□ 0.63
ECHDC3-201ENST00000379215 LOC102723971A0A1B0GUV8 181 aa18.95■□□□□ 0.62
ECHDC3-201ENST00000379215 HAGHQ16775 308 aa18.95■□□□□ 0.62
ECHDC3-201ENST00000379215 TXNDC17Q9BRA2 123 aa18.95■□□□□ 0.62
ECHDC3-201ENST00000379215 TMPRSS5Q9H3S3 457 aa18.95■□□□□ 0.62
ECHDC3-201ENST00000379215 I3L521 148 aa18.94■□□□□ 0.62
ECHDC3-201ENST00000379215 NDUFS6O75380 124 aaKnown RBP18.94■□□□□ 0.62
ECHDC3-201ENST00000379215 LINC01006Q8NI28 216 aa18.94■□□□□ 0.62
ECHDC3-201ENST00000379215 PAXXQ9BUH6 204 aa18.94■□□□□ 0.62
ECHDC3-201ENST00000379215 SCRT1Q9BWW7 348 aa18.94■□□□□ 0.62
ECHDC3-201ENST00000379215 OR51M1Q9H341 326 aa18.94■□□□□ 0.62
ECHDC3-201ENST00000379215 KRBOX1C9JBD0 128 aa18.93■□□□□ 0.62
ECHDC3-201ENST00000379215 HSPB1P04792 205 aaKnown RBP18.93■□□□□ 0.62
ECHDC3-201ENST00000379215 MORN5Q5VZ52 161 aa18.93■□□□□ 0.62
ECHDC3-201ENST00000379215 NARS2Q96I59 477 aaKnown RBP18.93■□□□□ 0.62
ECHDC3-201ENST00000379215 TMEM14CQ9P0S9 112 aa18.93■□□□□ 0.62
ECHDC3-201ENST00000379215 TRAV5A0A0B4J249 113 aa18.92■□□□□ 0.62
ECHDC3-201ENST00000379215 CDX1P47902 265 aaPredicted RBP18.92■□□□□ 0.62
ECHDC3-201ENST00000379215 UBE2L3P68036 154 aaKnown RBP18.92■□□□□ 0.62
ECHDC3-201ENST00000379215 SUN5Q8TC36 379 aa18.92■□□□□ 0.62
ECHDC3-201ENST00000379215 WIPF2Q8TF74 440 aaPredicted RBP18.92■□□□□ 0.62
ECHDC3-201ENST00000379215 METTL26Q96S19 204 aa18.92■□□□□ 0.62
ECHDC3-201ENST00000379215 NSD1Q96L73 2696 aaPredicted RBP18.92■□□□□ 0.62
ECHDC3-201ENST00000379215 TRBV12-3P01733 135 aa18.92■□□□□ 0.62
ECHDC3-201ENST00000379215 BPIFA4PQ86YQ2 179 aa18.92■□□□□ 0.62
ECHDC3-201ENST00000379215 IGHV3-35A0A0C4DH35 117 aa18.91■□□□□ 0.62
ECHDC3-201ENST00000379215 ZNF98A6NK75 572 aa18.91■□□□□ 0.62
ECHDC3-201ENST00000379215 SRSF3P84103 164 aaKnown RBP18.91■□□□□ 0.62
ECHDC3-201ENST00000379215 MEF2BQ02080 365 aaPredicted RBP18.91■□□□□ 0.62
ECHDC3-201ENST00000379215 ICAM4Q14773 271 aa18.91■□□□□ 0.62
ECHDC3-201ENST00000379215 ZNF503Q96F45 646 aa18.91■□□□□ 0.62
ECHDC3-201ENST00000379215 ZNF414Q96IQ9 312 aa18.91■□□□□ 0.62
ECHDC3-201ENST00000379215 RARRES2Q99969 163 aa18.91■□□□□ 0.62
ECHDC3-201ENST00000379215 TMEM231Q9H6L2 316 aa18.91■□□□□ 0.62
ECHDC3-201ENST00000379215 TMEM218A2RU14 115 aa18.89■□□□□ 0.62
ECHDC3-201ENST00000379215 FAM106AQ4KMX7 169 aa18.89■□□□□ 0.62
ECHDC3-201ENST00000379215 GPHB5Q86YW7 130 aa18.89■□□□□ 0.62
ECHDC3-201ENST00000379215 RXFP4Q8TDU9 374 aa18.89■□□□□ 0.62
ECHDC3-201ENST00000379215 OR5B12Q96R08 314 aa18.89■□□□□ 0.62
ECHDC3-201ENST00000379215 SLC35B3Q9H1N7 401 aa18.89■□□□□ 0.62
ECHDC3-201ENST00000379215 PAGE4O60829 102 aa18.89■□□□□ 0.61
ECHDC3-201ENST00000379215 GP9P14770 177 aa18.89■□□□□ 0.61
ECHDC3-201ENST00000379215 ZP3P21754 424 aa18.89■□□□□ 0.61
ECHDC3-201ENST00000379215 NPPCP23582 126 aa18.89■□□□□ 0.61
ECHDC3-201ENST00000379215 C4orf3Q8WVX3 66 aa18.89■□□□□ 0.61
ECHDC3-201ENST00000379215 TMEM190Q8WZ59 177 aa18.89■□□□□ 0.61
ECHDC3-201ENST00000379215 NKX6-2Q9C056 277 aaPredicted RBP18.89■□□□□ 0.61
ECHDC3-201ENST00000379215 A0A1B0GUS0 222 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 CLPSL1A2RUU4 121 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 CYSRT1A8MQ03 144 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 OR10J4P0C629 311 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 RPL7P18124 248 aaKnown RBP18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 RPEL1Q2QD12 228 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 C1orf194Q5T5A4 169 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 OR4F17Q8NGA8 305 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 FXYD5Q96DB9 178 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 GPR82Q96P67 336 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 OR4F4Q96R69 305 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 C20orf24Q9BUV8 137 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 RNF114Q9Y508 228 aa18.88■□□□□ 0.61
ECHDC3-201ENST00000379215 SETXQ7Z333 2677 aaKnown RBP18.87■□□□□ 0.61
ECHDC3-201ENST00000379215 A0A1W2PRE2 83 aa18.87■□□□□ 0.61
ECHDC3-201ENST00000379215 CRYBB3P26998 211 aa18.87■□□□□ 0.61
ECHDC3-201ENST00000379215 C11orf94C9JXX5 98 aa18.86■□□□□ 0.61
ECHDC3-201ENST00000379215 PDE6DO43924 150 aa18.86■□□□□ 0.61
ECHDC3-201ENST00000379215 SFTA3P0C7M3 94 aa18.86■□□□□ 0.61
ECHDC3-201ENST00000379215 PYYP10082 97 aa18.86■□□□□ 0.61
ECHDC3-201ENST00000379215 UBE2G2P60604 165 aa18.86■□□□□ 0.61
ECHDC3-201ENST00000379215 KHDC1LQ5JSQ8 128 aa18.86■□□□□ 0.61
ECHDC3-201ENST00000379215 CST9LP1Q5W188 147 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms