RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 SNRPCP09234 159 aaKnown RBP13.51□□□□□ -0.25
THUMPD2-201ENST00000378727 RPL23P62829 140 aaKnown RBP13.51□□□□□ -0.25
THUMPD2-201ENST00000378727 USF2Q15853 346 aaPredicted RBP13.51□□□□□ -0.25
THUMPD2-201ENST00000378727 ZNF343Q6P1L6 599 aa13.51□□□□□ -0.25
THUMPD2-201ENST00000378727 STXBP6Q8NFX7 210 aa13.51□□□□□ -0.25
THUMPD2-201ENST00000378727 ISOC2Q96AB3 205 aa13.51□□□□□ -0.25
THUMPD2-201ENST00000378727 CCDC140Q96MF4 163 aa13.51□□□□□ -0.25
THUMPD2-201ENST00000378727 B4DEV8 164 aa13.51□□□□□ -0.25
THUMPD2-201ENST00000378727 TUBA4BQ9H853 241 aa13.51□□□□□ -0.25
THUMPD2-201ENST00000378727 TRBV20OR9-2A0A075B6H5 130 aa13.5□□□□□ -0.25
THUMPD2-201ENST00000378727 SMAD7O15105 426 aaKnown RBP13.5□□□□□ -0.25
THUMPD2-201ENST00000378727 PPIFP30405 207 aaKnown RBP13.5□□□□□ -0.25
THUMPD2-201ENST00000378727 GPR183P32249 361 aa13.5□□□□□ -0.25
THUMPD2-201ENST00000378727 SUMO1P63165 101 aaKnown RBP13.5□□□□□ -0.25
THUMPD2-201ENST00000378727 ADIRFQ15847 76 aa13.5□□□□□ -0.25
THUMPD2-201ENST00000378727 Q6YL49 198 aa13.5□□□□□ -0.25
THUMPD2-201ENST00000378727 Q8WTZ3 238 aa13.5□□□□□ -0.25
THUMPD2-201ENST00000378727 SHANK2-AS3Q9BTD1 123 aa13.5□□□□□ -0.25
THUMPD2-201ENST00000378727 MXRA5Q9NR99 2828 aa13.49□□□□□ -0.25
THUMPD2-201ENST00000378727 COLCA2A8K830 154 aa13.49□□□□□ -0.25
THUMPD2-201ENST00000378727 H3BRN7 92 aa13.49□□□□□ -0.25
THUMPD2-201ENST00000378727 CLEC3BP05452 202 aa13.49□□□□□ -0.25
THUMPD2-201ENST00000378727 CRYBB3P26998 211 aa13.49□□□□□ -0.25
THUMPD2-201ENST00000378727 OR5R1Q8NH85 324 aa13.49□□□□□ -0.25
THUMPD2-201ENST00000378727 FOXC2Q99958 501 aa13.49□□□□□ -0.25
THUMPD2-201ENST00000378727 ELOVL1Q9BW60 279 aa13.49□□□□□ -0.25
THUMPD2-201ENST00000378727 ZNF600Q6ZNG1 722 aa13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 PGPEP1LA6NFU8 196 aa13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 AP4M1O00189 453 aa13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 NBEAP1P0C6P0 100 aa13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 FLNAP21333 2647 aaKnown RBP13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 MYCNOSP40205 109 aa13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 CLEC19AQ6UXS0 136 aa13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 BLNKQ8WV28 456 aa13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 EEF1AKMT3Q96AZ1 226 aa13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 PRDM13Q9H4Q3 707 aa13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 TMEM14CQ9P0S9 112 aa13.48□□□□□ -0.25
THUMPD2-201ENST00000378727 TRBV7-1A0A0A6YYK4 115 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 FAM223BA6NKX1 122 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 SCGB2A1O75556 95 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 TRGV3P03979 118 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 ATP5G2Q06055 141 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 RNF212Q495C1 297 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 LINC01551Q86U37 167 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 ZNF329Q86UD4 541 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 FAM223AQ8IWN6 122 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 C15orf54Q8N8G6 183 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 C2CD4CQ8TF44 421 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 YPEL4Q96NS1 127 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 VPREB3Q9UKI3 123 aa13.47□□□□□ -0.25
THUMPD2-201ENST00000378727 IGHV3-35A0A0C4DH35 117 aa13.46□□□□□ -0.25
THUMPD2-201ENST00000378727 BRI3O95415 125 aa13.46□□□□□ -0.25
THUMPD2-201ENST00000378727 RPL35P42766 123 aaKnown RBP13.46□□□□□ -0.25
THUMPD2-201ENST00000378727 RANP62826 216 aaKnown RBP13.46□□□□□ -0.25
THUMPD2-201ENST00000378727 AURKAIP1Q9NWT8 199 aaPredicted RBP13.46□□□□□ -0.25
THUMPD2-201ENST00000378727 ZNF98A6NK75 572 aa13.46□□□□□ -0.26
THUMPD2-201ENST00000378727 H3BTX0 84 aa13.46□□□□□ -0.26
THUMPD2-201ENST00000378727 CFHR3Q02985 330 aa13.46□□□□□ -0.26
THUMPD2-201ENST00000378727 TMEM95Q3KNT9 176 aa13.46□□□□□ -0.26
THUMPD2-201ENST00000378727 ZNF586Q9NXT0 402 aa13.46□□□□□ -0.26
THUMPD2-201ENST00000378727 TLN2Q9Y4G6 2542 aa13.46□□□□□ -0.26
THUMPD2-201ENST00000378727 HOXA3O43365 443 aaPredicted RBP13.45□□□□□ -0.26
THUMPD2-201ENST00000378727 IL17RELQ6ZVW7 336 aa13.45□□□□□ -0.26
THUMPD2-201ENST00000378727 FAM24BQ8N5W8 94 aa13.45□□□□□ -0.26
THUMPD2-201ENST00000378727 HIST1H2BAQ96A08 127 aa13.45□□□□□ -0.26
THUMPD2-201ENST00000378727 GAR1Q9NY12 217 aaKnown RBP13.45□□□□□ -0.26
THUMPD2-201ENST00000378727 H3BUA1 57 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 MRPS12O15235 138 aaKnown RBP13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 TGOLN2O43493 480 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 IGLV1-40P01703 118 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 TPPP2P59282 170 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 KRTAP1-1Q07627 177 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 TOMM20LQ6UXN7 152 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 KLK15Q9H2R5 256 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 ZFAND3Q9H8U3 227 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 TMEM242Q9NWH2 141 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 ZNF580Q9UK33 172 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 IGHV3OR16-8A0A075B7F1 116 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 HIST1H1EP10412 219 aaKnown RBP13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 OCC1Q8TAD7 63 aa13.44□□□□□ -0.26
THUMPD2-201ENST00000378727 HECTD1Q9ULT8 2610 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 CXorf65A6NEN9 183 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 HELTA6NFD8 242 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 C9JCJ5 164 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 IGLC2P0DOY2 106 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 BPIFA4PQ86YQ2 179 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 GNB4Q9HAV0 340 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 FASNP49327 2511 aaKnown RBP13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 PPP5D1E7EU14 171 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 MT-ND4LP03901 98 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 ATP6V0BQ99437 205 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 CTDSP1Q9GZU7 261 aa13.43□□□□□ -0.26
THUMPD2-201ENST00000378727 PGPA6NDG6 321 aa13.42□□□□□ -0.26
THUMPD2-201ENST00000378727 PF4V1P10720 104 aa13.42□□□□□ -0.26
THUMPD2-201ENST00000378727 GNG5P63218 68 aa13.42□□□□□ -0.26
THUMPD2-201ENST00000378727 LCNL1Q6ZST4 164 aa13.42□□□□□ -0.26
THUMPD2-201ENST00000378727 LINC00479Q96M42 142 aa13.42□□□□□ -0.26
THUMPD2-201ENST00000378727 C17orf77Q96MU5 243 aa13.42□□□□□ -0.26
THUMPD2-201ENST00000378727 Q9H3A6 140 aa13.42□□□□□ -0.26
THUMPD2-201ENST00000378727 RABAC1Q9UI14 185 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms