RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 A0A1W2PPR1 153 aa13.55□□□□□ -0.24
PHF1-202ENST00000374516 K7EP13 123 aa13.55□□□□□ -0.24
PHF1-202ENST00000374516 OR2J3O76001 311 aa13.55□□□□□ -0.24
PHF1-202ENST00000374516 ANKRD39Q53RE8 183 aa13.55□□□□□ -0.24
PHF1-202ENST00000374516 ST6GALNAC6Q969X2 333 aa13.55□□□□□ -0.24
PHF1-202ENST00000374516 TMEM133Q9H2Q1 129 aa13.55□□□□□ -0.24
PHF1-202ENST00000374516 OR10W1Q8NGF6 305 aa13.54□□□□□ -0.24
PHF1-202ENST00000374516 OR2T6Q8NHC8 308 aa13.54□□□□□ -0.24
PHF1-202ENST00000374516 TMEM186Q96B77 213 aa13.54□□□□□ -0.24
PHF1-202ENST00000374516 FLYWCH2Q96CP2 140 aaKnown RBP13.54□□□□□ -0.24
PHF1-202ENST00000374516 IGHV3-72A0A0B4J1Y9 119 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 PYYP10082 97 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 CAMPP49913 170 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 ZNF329Q86UD4 541 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 KIR3DL3Q8N743 410 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 OR2D3Q8NGH3 330 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 C22orf15Q8WYQ4 148 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 ARHGAP32A7KAX9 2087 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 HIGD1CA8MV81 97 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 VWC2LB2RUY7 222 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 SPATA12Q7Z6I5 190 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 LINC00311Q8N616 119 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 OSR1Q8TAX0 266 aaPredicted RBP13.53□□□□□ -0.24
PHF1-202ENST00000374516 CACNG8Q8WXS5 425 aa13.53□□□□□ -0.24
PHF1-202ENST00000374516 LOC105371242A0A075B767 164 aa13.52□□□□□ -0.24
PHF1-202ENST00000374516 PPIAL4CA0A0B4J2A2 164 aa13.52□□□□□ -0.24
PHF1-202ENST00000374516 PEX7O00628 323 aa13.52□□□□□ -0.24
PHF1-202ENST00000374516 PPIAL4GP0DN37 164 aa13.52□□□□□ -0.24
PHF1-202ENST00000374516 C11orf71Q6IPW1 123 aa13.52□□□□□ -0.24
PHF1-202ENST00000374516 PRR27Q6MZM9 219 aa13.52□□□□□ -0.24
PHF1-202ENST00000374516 ZNF596Q8TC21 504 aa13.52□□□□□ -0.24
PHF1-202ENST00000374516 RITA1Q96K30 269 aa13.52□□□□□ -0.24
PHF1-202ENST00000374516 CHRDL1Q9BU40 450 aa13.52□□□□□ -0.24
PHF1-202ENST00000374516 PAXXQ9BUH6 204 aa13.52□□□□□ -0.24
PHF1-202ENST00000374516 FLNCQ14315 2725 aa13.52□□□□□ -0.25
PHF1-202ENST00000374516 IGHV2-70DA0A0C4DH43 119 aa13.52□□□□□ -0.25
PHF1-202ENST00000374516 FBLN7Q53RD9 439 aa13.52□□□□□ -0.25
PHF1-202ENST00000374516 URB1-AS1Q96HZ7 61 aa13.52□□□□□ -0.25
PHF1-202ENST00000374516 TMEM70Q9BUB7 260 aa13.52□□□□□ -0.25
PHF1-202ENST00000374516 A0A1W2PN81 502 aa13.51□□□□□ -0.25
PHF1-202ENST00000374516 CORTO00230 105 aa13.51□□□□□ -0.25
PHF1-202ENST00000374516 HIST1H1EP10412 219 aaKnown RBP13.51□□□□□ -0.25
PHF1-202ENST00000374516 C8orf31Q8N9H6 132 aa13.51□□□□□ -0.25
PHF1-202ENST00000374516 OR4C13Q8NGP0 309 aa13.51□□□□□ -0.25
PHF1-202ENST00000374516 MED13LQ71F56 2210 aa13.51□□□□□ -0.25
PHF1-202ENST00000374516 E7EUB6 86 aa13.51□□□□□ -0.25
PHF1-202ENST00000374516 ENSAO43768 121 aaKnown RBP13.51□□□□□ -0.25
PHF1-202ENST00000374516 COX7A1P24310 79 aa13.51□□□□□ -0.25
PHF1-202ENST00000374516 TMEM177Q53S58 311 aa13.51□□□□□ -0.25
PHF1-202ENST00000374516 ATP5L2Q7Z4Y8 100 aa13.51□□□□□ -0.25
PHF1-202ENST00000374516 ITLN2Q8WWU7 325 aaPredicted RBP13.51□□□□□ -0.25
PHF1-202ENST00000374516 CLEC5AQ9NY25 188 aa13.51□□□□□ -0.25
PHF1-202ENST00000374516 CSMD1Q96PZ7 3565 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 A0A1B0GXF2 115 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 COX7A2P2O60397 106 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 CDKN1BP46527 198 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 SSBP2P81877 361 aaPredicted RBP13.5□□□□□ -0.25
PHF1-202ENST00000374516 C10orf113Q5VZT2 155 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 PATE2Q6UY27 113 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 C7orf69Q9H7B7 122 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 PLXNB1O43157 2135 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 C19orf84I3L1E1 186 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 CRXO43186 299 aaPredicted RBP13.5□□□□□ -0.25
PHF1-202ENST00000374516 NDUFS7O75251 213 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 NDUFA4L2Q9NRX3 87 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 ONECUT1Q9UBC0 465 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 WASHC3Q9Y3C0 194 aa13.5□□□□□ -0.25
PHF1-202ENST00000374516 C22orf46C9J442 243 aa13.49□□□□□ -0.25
PHF1-202ENST00000374516 ZNF137PP52743 207 aa13.49□□□□□ -0.25
PHF1-202ENST00000374516 ERHP84090 104 aaKnown RBP13.49□□□□□ -0.25
PHF1-202ENST00000374516 C10orf55Q5SWW7 151 aa13.49□□□□□ -0.25
PHF1-202ENST00000374516 PDPNQ86YL7 162 aa13.49□□□□□ -0.25
PHF1-202ENST00000374516 OR4C5Q8NGB2 326 aa13.49□□□□□ -0.25
PHF1-202ENST00000374516 OR4C46A6NHA9 309 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 PRR31Q5SQ13 230 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 FAM120AOSQ5T036 256 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 OR1L4Q8NGR5 311 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 FXYD5Q96DB9 178 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 TIMD4Q96H15 378 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 VPS13CQ709C8 3753 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 SH2D7A6NKC9 451 aaPredicted RBP13.48□□□□□ -0.25
PHF1-202ENST00000374516 SLC25A17O43808 307 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 FSTL3O95633 263 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 IGLV1-47P01700 117 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 IGLV2-23P01705 113 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 GNG5P63218 68 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 SAPCD1Q5SSQ6 148 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 FAM162BQ5T6X4 162 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 FAM71F2Q6NXP2 309 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 TPSG1Q9NRR2 321 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 ZFYVE26Q68DK2 2539 aa13.48□□□□□ -0.25
PHF1-202ENST00000374516 MYCNOSP40205 109 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 ARF6P62330 175 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 MPV17L2Q567V2 206 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 UBTD1Q9HAC8 227 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 NAV3Q8IVL0 2385 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 VAMP3Q15836 100 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 TCF24Q7RTU0 167 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 NEU4Q8WWR8 484 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms