RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 UBE2G1P62253 170 aa12.61□□□□□ -0.39
CNKSR1-202ENST00000374253 PRO1933Q9H354 126 aa12.61□□□□□ -0.39
CNKSR1-202ENST00000374253 Q9H3A6 140 aa12.61□□□□□ -0.39
CNKSR1-202ENST00000374253 ABCA2Q9BZC7 2435 aa12.61□□□□□ -0.39
CNKSR1-202ENST00000374253 IGHV3OR16-10A0A075B7F0 116 aa12.61□□□□□ -0.39
CNKSR1-202ENST00000374253 TRAV20A0A0B4J274 112 aa12.61□□□□□ -0.39
CNKSR1-202ENST00000374253 EFNA4P52798 201 aa12.61□□□□□ -0.39
CNKSR1-202ENST00000374253 PRDM13Q9H4Q3 707 aa12.61□□□□□ -0.39
CNKSR1-202ENST00000374253 IGHV3OR16-8A0A075B7F1 116 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 IL4P05112 153 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 SFTPCP11686 197 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 TMEM11P17152 192 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 CD33P20138 364 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 CTAG1AP78358 180 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 ARPC1AQ92747 370 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 SIRPDQ9H106 197 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 ZNF586Q9NXT0 402 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 NAT8BQ9UHF3 227 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 IGHV3-35A0A0C4DH35 117 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 TAS2R60P59551 318 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 NUDT10Q8NFP7 164 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 STXBP6Q8NFX7 210 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 NUDT11Q96G61 164 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 TP53TG3Q9ULZ0 132 aa12.6□□□□□ -0.39
CNKSR1-202ENST00000374253 FANCD2OSQ96PS1 177 aa12.59□□□□□ -0.39
CNKSR1-202ENST00000374253 TBX15Q96SF7 602 aa12.59□□□□□ -0.39
CNKSR1-202ENST00000374253 OR2J3O76001 311 aa12.59□□□□□ -0.39
CNKSR1-202ENST00000374253 GZMBP10144 247 aa12.59□□□□□ -0.39
CNKSR1-202ENST00000374253 PAX2Q02962 417 aa12.59□□□□□ -0.39
CNKSR1-202ENST00000374253 LINC00322Q6ZN03 302 aaPredicted RBP12.59□□□□□ -0.39
CNKSR1-202ENST00000374253 GBGT1Q8N5D6 347 aa12.59□□□□□ -0.39
CNKSR1-202ENST00000374253 IGHV2-70DA0A0C4DH43 119 aa12.58□□□□□ -0.4
CNKSR1-202ENST00000374253 GNG7O60262 68 aa12.58□□□□□ -0.4
CNKSR1-202ENST00000374253 CRISP2P16562 243 aa12.58□□□□□ -0.4
CNKSR1-202ENST00000374253 FCGR2BP31994 310 aaPredicted RBP12.58□□□□□ -0.4
CNKSR1-202ENST00000374253 PLP1P60201 277 aa12.58□□□□□ -0.4
CNKSR1-202ENST00000374253 LMO4P61968 165 aa12.58□□□□□ -0.4
CNKSR1-202ENST00000374253 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
CNKSR1-202ENST00000374253 ZNF562Q6V9R5 426 aa12.58□□□□□ -0.4
CNKSR1-202ENST00000374253 GATCO43716 136 aaKnown RBP12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 SAA4P35542 130 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 TMEM183BQ1AE95 376 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 Q56UQ5 140 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 ZNF491Q8N8L2 437 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 TMEM18Q96B42 140 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 HSPB9Q9BQS6 159 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 DOPEY1Q5JWR5 2465 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 POLQO75417 2590 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 NDUFB8O95169 186 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 IGHV4-39P01824 125 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 TCRAP04437 139 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 LINC00310P59036 64 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 USF2Q15853 346 aaPredicted RBP12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 RNF125Q96EQ8 232 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 MRPL27Q9P0M9 148 aaKnown RBP12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 FAM208BQ5VWN6 2430 aa12.57□□□□□ -0.4
CNKSR1-202ENST00000374253 SMIM27A0A1W2PRY6 76 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 OR2T8A6NH00 312 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 SERF1AO75920 110 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 JOSD1Q15040 202 aaPredicted RBP12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 TMEM136Q6ZRR5 245 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 C1orf122Q6ZSJ8 110 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 GOLT1AQ6ZVE7 132 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 Q8N6K4 173 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 ATG101Q9BSB4 218 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 IGLV11-55A0A075B6I3 123 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 ECSCRQ19T08 205 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 C5orf17Q8NAS9 161 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 AJUBAQ96IF1 538 aa12.56□□□□□ -0.4
CNKSR1-202ENST00000374253 TRAV9-1A0A075B6T8 112 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 IGHV7-81A0A0B4J1V7 117 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 BAGE3Q86Y29 109 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 CMTM2Q8TAZ6 248 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 SRSF8Q9BRL6 282 aaKnown RBP12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■□□□□ 11
CNKSR1-202ENST00000374253 LINC01548A6NM66 108 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 F8W735 103 aaPredicted RBP12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 EGR2P11161 476 aaPredicted RBP12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 TCF24Q7RTU0 167 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 CIARTQ8N365 385 aaPredicted RBP12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 Q8N9W7 124 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 NUP35Q8NFH5 326 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 TMUB1Q9BVT8 246 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 C7orf69Q9H7B7 122 aa12.55□□□□□ -0.4
CNKSR1-202ENST00000374253 CAMPP49913 170 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 MINOS1Q5TGZ0 78 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 PRNTQ86SH4 94 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 GPR82Q96P67 336 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 NEU1Q99519 415 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 SHANK2-AS3Q9BTD1 123 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 SSBP4Q9BWG4 385 aaPredicted RBP12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 GNB1LQ9BYB4 327 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 MINOS1-NBL1R4GNA1 71 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 VWC2LB2RUY7 222 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 RNF224P0DH78 156 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 HIST1H1EP10412 219 aaKnown RBP12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 GNB4Q9HAV0 340 aa12.54□□□□□ -0.4
CNKSR1-202ENST00000374253 HIGD1CA8MV81 97 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 M0R3E3 92 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms