RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TEP1Q99973 2627 aaKnown RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 A0A0D9SG52 128 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 TEX46H3BTG2 121 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 FGF16O43320 207 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 CNIH1O95406 144 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 S100A11P31949 105 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 SULT1A1P50225 295 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 AKR1D1P51857 326 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 OR2F1Q13607 317 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 ZNF345Q14585 488 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 PVRIGQ6DKI7 326 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 TEX29Q8N6K0 151 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 SFT2D1Q8WV19 159 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 URB1-AS1Q96HZ7 61 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 CIB3Q96Q77 187 aaPredicted RBP2.76□□□□□ -1.97
MCF2-202ENST00000370573 P2RX4Q99571 388 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 C2orf88Q9BSF0 95 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 ARL6Q9H0F7 186 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 HIPK2Q9H2X6 1198 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 ENY2Q9NPA8 101 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 ESM1Q9NQ30 184 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 CACFD1Q9UGQ2 172 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 A0A1W2PN81 502 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 RAB19A4D1S5 217 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 HSBP1L1C9JCN9 74 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 INAFM1C9JVW0 142 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 G3V318 75 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 ATP6V0E1O15342 81 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 BCL2L11O43521 198 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 CIDEAO60543 219 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 CFDP00746 253 aaPredicted RBP2.76□□□□□ -1.97
MCF2-202ENST00000370573 PRH1P02810 166 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 CHRNA7P36544 502 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 C2orf83Q53S99 150 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 RPL7L1Q6DKI1 246 aaKnown RBP2.76□□□□□ -1.97
MCF2-202ENST00000370573 SUMO4Q6EEV6 95 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 OR8G2PQ6IF36 304 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 MRPL52Q86TS9 123 aaKnown RBP2.76□□□□□ -1.97
MCF2-202ENST00000370573 LFNGQ8NES3 379 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 OR5T1Q8NG75 326 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 ARPC1AQ92747 370 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 TAF15Q92804 592 aaKnown RBP eCLIP2.76□□□□□ -1.97
MCF2-202ENST00000370573 SLC25A31Q9H0C2 315 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 LINC00527Q9UJ94 153 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 PITPNC1Q9UKF7 332 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 VPREB3Q9UKI3 123 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 RFNGQ9Y644 331 aa2.76□□□□□ -1.97
MCF2-202ENST00000370573 IGHG2P01859 326 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 CRYGCP07315 174 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 HNF1AP20823 631 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 NPY1RP25929 384 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 SNCAP37840 140 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 RPL35P42766 123 aaKnown RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 RAB5BP61020 215 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 ERHP84090 104 aaKnown RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 BAXQ07812 192 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 SLC38A11Q08AI6 406 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 CLINT1Q14677 625 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 CD164L2Q6UWJ8 174 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 C16orf82Q7Z2V1 217 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 TTC9CQ8N5M4 171 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 OR1S2Q8NGQ3 325 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 OR5C1Q8NGR4 320 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 SGMS2Q8NHU3 365 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 CXorf58Q96LI9 332 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 NOL4LQ96MY1 436 aaPredicted RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 ARV1Q9H2C2 271 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 FNDC4Q9H6D8 234 aaPredicted RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 PARP11Q9NR21 331 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 MRPL36Q9P0J6 103 aaKnown RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 CUBNO60494 3623 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 KANTRA0A1W2PQU2 76 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 M0QZK8 103 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 DNASE2O00115 360 aaPredicted RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 NUPL2O15504 423 aaKnown RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 SOX15O60248 233 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 SCO1O75880 301 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 IGHV3-48P01763 117 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 OR8U8P0C7N1 319 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 LINC00614P0C842 121 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 MDKP21741 143 aaPredicted RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 CRIP2P52943 208 aaPredicted RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 ATP5IP56385 69 aaPredicted RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 UNQ5815/PRO19632Q6UWF5 114 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 TMEM86BQ8N661 226 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 ZNF114Q8NC26 417 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 OR10P1Q8NGE3 313 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 OR1P1Q8NH06 330 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 OR2T6Q8NHC8 308 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 ZNF702PQ9H963 129 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 PAM16Q9Y3D7 125 aa2.75□□□□□ -1.97
MCF2-202ENST00000370573 F11RQ9Y624 299 aaKnown RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 SETD2Q9BYW2 2564 aaPredicted RBP2.75□□□□□ -1.97
MCF2-202ENST00000370573 IGLV11-55A0A075B6I3 123 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 IGHV3-21A0A0B4J1V1 117 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 BTBD17A6NE02 478 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 I3L2K1 104 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 TAAR5O14804 337 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 NDUFB8O95169 186 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 IGF1P05019 195 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms