RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 RBMY1A1P0DJD3 496 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 IGHV4-38-2P0DP08 117 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 ERGP11308 486 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 PPIBP23284 216 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 TAS2R46P59540 309 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 PPP1CAP62136 330 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 DHRS2Q13268 280 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 PNOCQ13519 176 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 KIAA0040Q15053 153 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 AMMECR1LQ6DCA0 310 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 IZUMO2Q6UXV1 221 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 Q6ZRU5 148 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 METTL27Q8N6F8 245 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 OR2T27Q8NH04 317 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 OR1L3Q8NH93 324 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 IGF2BP2-AS1Q96M15 143 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 SPACA5Q96QH8 159 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 PRSS27Q9BQR3 290 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 RHNO1Q9BSD3 238 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 FGFBP2Q9BYJ0 223 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 TMEM191AQ9H0A3 160 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 POLR2J3Q9H1A7 115 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 BET1LQ9NYM9 111 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 TVP23BQ9NYZ1 205 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 RBM12B-AS1Q9P1G2 102 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 SHPKQ9UHJ6 478 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 RPUSD1Q9UJJ7 312 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 SCN2AQ99250 2005 aa3.87□□□□□ -1.79
ECHDC1-204ENST00000368292 IGLV1-36A0A0B4J1U3 117 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 IGHV5-51A0A0C4DH38 117 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 A0A0D9SEW6 157 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 COLCA2A8K830 154 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 G3V3Q6 166 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 H0Y9J4 135 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 CCDC179H3BU77 68 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 ANGPTL7O43827 346 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 SS18L1O75177 396 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 CA2P00918 260 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 SPINK8P0C7L1 97 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 P0DMU3 169 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 FAM231AP0DMU4 169 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 FAM231CP0DMU5 169 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 GADD45AP24522 165 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 PSMB2P49721 201 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 ADIGQ0VDE8 80 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 ZNF141Q15928 474 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 FAM222AQ5U5X8 452 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 TMEM244Q5VVB8 128 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 SBSNQ6UWP8 590 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 ZNF493Q6ZR52 646 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 ZNF571Q7Z3V5 609 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 ATP5L2Q7Z4Y8 100 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 OR5D14Q8NGL3 314 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 SLC25A40Q8TBP6 338 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 LRRC29Q8WV35 223 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 CCL17Q92583 94 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 FRZBQ92765 325 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 CARD19Q96LW7 228 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 ZNF300Q96RE9 604 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 NMNAT3Q96T66 252 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 SLC25A21Q9BQT8 299 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 COMMD5Q9GZQ3 224 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 TUBA4BQ9H853 241 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 EXOSC3Q9NQT5 275 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 RPRMQ9NS64 109 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 RARRES3Q9UL19 164 aa3.86□□□□□ -1.79
ECHDC1-204ENST00000368292 RAI1Q7Z5J4 1906 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 DOCK4Q8N1I0 1966 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 PGPA6NDG6 321 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 E9PLD3 99 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 GABARAPH6UMI1 98 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 UPK2O00526 184 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 CD5LO43866 347 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 PGLYRP1O75594 196 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 SCRG1O75711 98 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 TNFSF13O75888 250 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 GZMBP10144 247 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 NDUFA8P51970 172 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 FOXA1P55317 472 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 CATR1Q13166 79 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 VMA21Q3ZAQ7 101 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 WDR38Q5JTN6 314 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 LCN15Q6UWW0 184 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 TMEM14EPQ6UXP3 125 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 CLEC19AQ6UXS0 136 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 VN1R4Q7Z5H5 301 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 LRRTM1Q86UE6 522 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 LHFPL1Q86WI0 220 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 RNF175Q8N4F7 328 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 TEX29Q8N6K0 151 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 ZDHHC22Q8N966 263 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 OR52P1PQ8NH57 321 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 MRPS24Q96EL2 167 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 BORCS8Q96FH0 119 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 PGLYRP4Q96LB8 373 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 THTPAQ9BU02 230 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 VAMP8Q9BV40 100 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 RTL8AQ9BWD3 113 aa3.85□□□□□ -1.79
ECHDC1-204ENST00000368292 MRPL32Q9BYC8 188 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms