RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 HS3ST2Q9Y278 367 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CCDC88CQ9P219 2028 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SMARCA4P51532 1647 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 MED23Q9ULK4 1368 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 STRCQ7RTU9 1775 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SHROOM3Q8TF72 1996 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TMSB15BA0A087X1C1 80 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 IGHV1-58A0A0C4DH39 117 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TRBV7-6A0A0J9YX20 115 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 EFCAB10A6NFE3 127 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 E7EQL1 145 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 LYZL6O75951 148 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CXCL1P09341 107 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SCTP09683 121 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 RNASE2P10153 161 aaKnown RBP1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CRYGAP11844 174 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 AQP4P55087 323 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 DYNLT1P63172 113 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 RELAQ04206 551 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 NNATQ16517 81 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 ZNF791Q3KP31 576 aaPredicted RBP1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 MORN2Q502X0 79 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SOSTDC1Q6X4U4 206 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 C3orf56Q8N813 242 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 OR4X2Q8NGF9 303 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 OR5D16Q8NGK9 328 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 C20orf166-AS1Q96NR2 134 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TSC22D3Q99576 134 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 PRO2289Q9P1D8 64 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 COPZ2Q9P299 210 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 PAIP2BQ9ULR5 123 aaKnown RBP1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 RNF11Q9Y3C5 154 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 A2MP01023 1474 aa1.98□□□□□ -2.09
RNU6-1249P-201ENST00000363237 ERCC6Q03468 1493 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 LTBP2Q14767 1821 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 A8MWV9 139 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 FNDC10F2Z333 226 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 DPM2O94777 84 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 NAPSAO96009 420 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 FABP2P12104 132 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CSRP1P21291 193 aaKnown RBP1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 PEBP1P30086 187 aaKnown RBP1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SLC38A11Q08AI6 406 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 MSMO1Q15800 293 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 VMA21Q3ZAQ7 101 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SPANXN5Q5MJ07 72 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 Q6ZQT0 140 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 ZNF826PQ6ZT77 177 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 Q6ZTI0 123 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 ZNF714Q96N38 554 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TAS2R4Q9NYW5 299 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 HSPB8Q9UJY1 196 aa1.97□□□□□ -2.09
RNU6-1249P-201ENST00000363237 NISCHQ9Y2I1 1504 aa1.96□□□□□ -2.09
RNU6-1249P-201ENST00000363237 ADAMTS7Q9UKP4 1686 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 J3QQQ9 107 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 TIMM17BO60830 172 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 TNFSF15O95150 251 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 OR2H2O95918 312 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 PMP2P02689 132 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 SHBGP04278 402 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 CTSDP07339 412 aaPredicted RBP1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 COX4I1P13073 169 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 CMPK1P30085 196 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 TCTE3Q8IZS6 198 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 LYPD1Q8N2G4 141 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 OR8J3Q8NGG0 315 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 OR8B3Q8NGG8 313 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 MCEEQ96PE7 176 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 PFDN5Q99471 154 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 CACYBPQ9HB71 228 aaKnown RBP1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 BCL2L10Q9HD36 194 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 NCOA3Q9Y6Q9 1424 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 SCN8AQ9UQD0 1980 aa1.96□□□□□ -2.1
RNU6-1249P-201ENST00000363237 IGLV3-9A0A075B6K5 115 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 LOC107984640A0A0U1RRK4 108 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 C9JAW5 83 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 PRB2P02812 416 aaPredicted RBP1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 SDC4P31431 198 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 KRTAP10-5P60370 271 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 ZNF345Q14585 488 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 SS18Q15532 418 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 ESRGQ1W209 222 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 PATE2Q6UY27 113 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 C4orf22Q6V702 233 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 LINC00305Q7Z4B0 112 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 LINC00471Q8N535 108 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 LINC00304Q8N9R0 145 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 TPT1P8Q9HAU6 139 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 HIGD1AQ9Y241 93 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 COL1A2P08123 1366 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 RTL9Q8NET4 1388 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 ANAPC1Q9H1A4 1944 aa1.95□□□□□ -2.1
RNU6-1249P-201ENST00000363237 IGKV1D-42A0A075B6H8 117 aa1.94□□□□□ -2.1
RNU6-1249P-201ENST00000363237 K7ERJ3 54 aa1.94□□□□□ -2.1
RNU6-1249P-201ENST00000363237 IGKV1-17P01599 117 aa1.94□□□□□ -2.1
RNU6-1249P-201ENST00000363237 BAALC-AS2P0C853 105 aa1.94□□□□□ -2.1
RNU6-1249P-201ENST00000363237 UBBP0CG47 229 aa1.94□□□□□ -2.1
RNU6-1249P-201ENST00000363237 ZNF705BP0CI00 300 aaPredicted RBP1.94□□□□□ -2.1
RNU6-1249P-201ENST00000363237 RPL26P61254 145 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms