RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZNF705EA8MWA4 302 aaPredicted RBP15.83■□□□□ 0.12
SHISA4-201ENST00000362011 RHOBP62745 196 aa15.83■□□□□ 0.12
SHISA4-201ENST00000362011 DEFA6Q01524 100 aa15.83■□□□□ 0.12
SHISA4-201ENST00000362011 DEFB136Q30KP8 78 aa15.83■□□□□ 0.12
SHISA4-201ENST00000362011 PATE2Q6UY27 113 aa15.83■□□□□ 0.12
SHISA4-201ENST00000362011 C8orf86Q6ZUL3 223 aa15.83■□□□□ 0.12
SHISA4-201ENST00000362011 TMEM37Q8WXS4 190 aa15.83■□□□□ 0.12
SHISA4-201ENST00000362011 DPF1Q92782 380 aa15.83■□□□□ 0.12
SHISA4-201ENST00000362011 ACTR3CQ9C0K3 210 aaPredicted RBP15.83■□□□□ 0.12
SHISA4-201ENST00000362011 HIGD1AQ9Y241 93 aa15.83■□□□□ 0.12
SHISA4-201ENST00000362011 LINC01619G3V211 115 aa15.82■□□□□ 0.12
SHISA4-201ENST00000362011 ZP3P21754 424 aa15.82■□□□□ 0.12
SHISA4-201ENST00000362011 CDC34P49427 236 aaPredicted RBP15.82■□□□□ 0.12
SHISA4-201ENST00000362011 USF2Q15853 346 aaPredicted RBP15.82■□□□□ 0.12
SHISA4-201ENST00000362011 FAM106AQ4KMX7 169 aa15.82■□□□□ 0.12
SHISA4-201ENST00000362011 FAM78BQ5VT40 261 aa15.82■□□□□ 0.12
SHISA4-201ENST00000362011 NDUFA11Q86Y39 141 aa15.82■□□□□ 0.12
SHISA4-201ENST00000362011 GPHB5Q86YW7 130 aa15.82■□□□□ 0.12
SHISA4-201ENST00000362011 RPP25LQ8N5L8 163 aaKnown RBP15.82■□□□□ 0.12
SHISA4-201ENST00000362011 OR1N2Q8NGR9 330 aa15.82■□□□□ 0.12
SHISA4-201ENST00000362011 RCC1LQ96I51 464 aaKnown RBP15.82■□□□□ 0.12
SHISA4-201ENST00000362011 MRPL32Q9BYC8 188 aaKnown RBP15.82■□□□□ 0.12
SHISA4-201ENST00000362011 SLC25A22Q9H936 323 aa15.82■□□□□ 0.12
SHISA4-201ENST00000362011 MRPL27Q9P0M9 148 aaKnown RBP15.82■□□□□ 0.12
SHISA4-201ENST00000362011 RABAC1Q9UI14 185 aa15.82■□□□□ 0.12
SHISA4-201ENST00000362011 SEC14L6B5MCN3 397 aa15.81■□□□□ 0.12
SHISA4-201ENST00000362011 FHITP49789 147 aa15.81■□□□□ 0.12
SHISA4-201ENST00000362011 BLOC1S1P78537 153 aa15.81■□□□□ 0.12
SHISA4-201ENST00000362011 S100A7AQ86SG5 101 aa15.81■□□□□ 0.12
SHISA4-201ENST00000362011 OR11H1Q8NG94 326 aa15.81■□□□□ 0.12
SHISA4-201ENST00000362011 SAT2Q96F10 170 aaPredicted RBP15.81■□□□□ 0.12
SHISA4-201ENST00000362011 C20orf24Q9BUV8 137 aa15.81■□□□□ 0.12
SHISA4-201ENST00000362011 FUT9Q9Y231 359 aa15.81■□□□□ 0.12
SHISA4-201ENST00000362011 CTXND1A0A1B0GTU2 59 aa15.8■□□□□ 0.12
SHISA4-201ENST00000362011 S100A7P31151 101 aa15.8■□□□□ 0.12
SHISA4-201ENST00000362011 RAB14P61106 215 aa15.8■□□□□ 0.12
SHISA4-201ENST00000362011 ZNF726P1Q15940 193 aa15.8■□□□□ 0.12
SHISA4-201ENST00000362011 NSUN5P1Q3KNT7 163 aa15.8■□□□□ 0.12
SHISA4-201ENST00000362011 TMEM190Q8WZ59 177 aa15.8■□□□□ 0.12
SHISA4-201ENST00000362011 IGHV3OR16-8A0A075B7F1 116 aa15.79■□□□□ 0.12
SHISA4-201ENST00000362011 ADARB2-AS1A8MUL3 147 aa15.79■□□□□ 0.12
SHISA4-201ENST00000362011 HOXD3P31249 432 aaPredicted RBP15.79■□□□□ 0.12
SHISA4-201ENST00000362011 SPATA31B1PQ5VZV4 182 aa15.79■□□□□ 0.12
SHISA4-201ENST00000362011 UNQ9165/PRO28630Q6UXU0 137 aa15.79■□□□□ 0.12
SHISA4-201ENST00000362011 LINC00305Q7Z4B0 112 aa15.79■□□□□ 0.12
SHISA4-201ENST00000362011 RAB24Q969Q5 203 aa15.79■□□□□ 0.12
SHISA4-201ENST00000362011 UHRF2Q96PU4 802 aa15.79■□□□□ 0.12
SHISA4-201ENST00000362011 CMYA5Q8N3K9 4069 aa15.79■□□□□ 0.12
SHISA4-201ENST00000362011 ZNF320A2RRD8 509 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 H3BRN7 92 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 H2AFB1P0C5Y9 115 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 SLURP1P55000 103 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 MIR17HGQ75NE6 70 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 SSX7Q7RTT5 188 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 REC114Q7Z4M0 266 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 C1QL4Q86Z23 238 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 PCNPQ8WW12 178 aaKnown RBP15.78■□□□□ 0.12
SHISA4-201ENST00000362011 RAX2Q96IS3 184 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 DUX3Q96PT4 197 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 METTL26Q96S19 204 aa15.78■□□□□ 0.12
SHISA4-201ENST00000362011 SLC25A39Q9BZJ4 359 aaPredicted RBP15.78■□□□□ 0.12
SHISA4-201ENST00000362011 SEPSECSQ9HD40 501 aaKnown RBP15.78■□□□□ 0.12
SHISA4-201ENST00000362011 CCL24O00175 119 aa15.77■□□□□ 0.12
SHISA4-201ENST00000362011 LGALS9O00182 355 aa15.77■□□□□ 0.12
SHISA4-201ENST00000362011 ZNF207O43670 478 aaKnown RBP15.77■□□□□ 0.12
SHISA4-201ENST00000362011 NMBP08949 121 aa15.77■□□□□ 0.12
SHISA4-201ENST00000362011 TAS2R45P59539 299 aa15.77■□□□□ 0.12
SHISA4-201ENST00000362011 MBD3L1Q8WWY6 194 aa15.77■□□□□ 0.12
SHISA4-201ENST00000362011 CITED1Q99966 193 aa15.77■□□□□ 0.12
SHISA4-201ENST00000362011 UFC1Q9Y3C8 167 aa15.77■□□□□ 0.12
SHISA4-201ENST00000362011 PRKDCP78527 4128 aaKnown RBP15.77■□□□□ 0.12
SHISA4-201ENST00000362011 VWFP04275 2813 aa15.77■□□□□ 0.11
SHISA4-201ENST00000362011 MAP1LC3B2A6NCE7 125 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 C8orf88P0DMB2 117 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 NPPCP23582 126 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 FHL3Q13643 280 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 KLF5Q13887 457 aaPredicted RBP15.76■□□□□ 0.11
SHISA4-201ENST00000362011 KHDC3LQ587J8 217 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 CLLU1Q5K131 121 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 MORN5Q5VZ52 161 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 LCN15Q6UWW0 184 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 SHANK2-AS3Q9BTD1 123 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 MAP1LC3BQ9GZQ8 125 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 TECRQ9NZ01 308 aaKnown RBP15.76■□□□□ 0.11
SHISA4-201ENST00000362011 PFDN2Q9UHV9 154 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 RNF24Q9Y225 148 aa15.76■□□□□ 0.11
SHISA4-201ENST00000362011 TEX46H3BTG2 121 aa15.75■□□□□ 0.11
SHISA4-201ENST00000362011 K7EMT4 169 aa15.75■□□□□ 0.11
SHISA4-201ENST00000362011 HMGB3O15347 200 aaKnown RBP15.75■□□□□ 0.11
SHISA4-201ENST00000362011 EIF3GO75821 320 aaKnown RBP eCLIP15.75■□□□□ 0.11
SHISA4-201ENST00000362011 HBE1P02100 147 aa15.75■□□□□ 0.11
SHISA4-201ENST00000362011 STAG3L2P0CL84 134 aa15.75■□□□□ 0.11
SHISA4-201ENST00000362011 STAG3L3P0CL85 134 aa15.75■□□□□ 0.11
SHISA4-201ENST00000362011 CRYBB3P26998 211 aa15.75■□□□□ 0.11
SHISA4-201ENST00000362011 SYNJ2BPP57105 145 aa15.75■□□□□ 0.11
SHISA4-201ENST00000362011 SFT2D1Q8WV19 159 aa15.75■□□□□ 0.11
SHISA4-201ENST00000362011 NARS2Q96I59 477 aaKnown RBP15.75■□□□□ 0.11
SHISA4-201ENST00000362011 SCRT1Q9BWW7 348 aa15.75■□□□□ 0.11
SHISA4-201ENST00000362011 A8MWP6 167 aa15.74■□□□□ 0.11
SHISA4-201ENST00000362011 MYCNOSP40205 109 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms