RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 TMEM133Q9H2Q1 129 aa16.36■□□□□ 0.21
COL13A1-202ENST00000357811 EPDR1Q9UM22 224 aa16.36■□□□□ 0.21
COL13A1-202ENST00000357811 SHISA9B4DS77 424 aa16.36■□□□□ 0.21
COL13A1-202ENST00000357811 DLX6P56179 175 aa16.36■□□□□ 0.21
COL13A1-202ENST00000357811 PLGLAQ15195 96 aa16.36■□□□□ 0.21
COL13A1-202ENST00000357811 COL5A1-AS1Q5SY13 56 aa16.36■□□□□ 0.21
COL13A1-202ENST00000357811 SPATA45Q537H7 98 aa16.35■□□□□ 0.21
COL13A1-202ENST00000357811 IGF2-ASQ6U949 168 aa16.35■□□□□ 0.21
COL13A1-202ENST00000357811 NIT1Q86X76 327 aa16.35■□□□□ 0.21
COL13A1-202ENST00000357811 C20orf202A1L168 122 aa16.35■□□□□ 0.21
COL13A1-202ENST00000357811 PTTG1IPP53801 180 aa16.35■□□□□ 0.21
COL13A1-202ENST00000357811 RNF2Q99496 336 aa16.35■□□□□ 0.21
COL13A1-202ENST00000357811 GRNP28799 593 aaKnown RBP16.35■□□□□ 0.21
COL13A1-202ENST00000357811 TCF15Q12870 199 aa16.35■□□□□ 0.21
COL13A1-202ENST00000357811 RNF151Q2KHN1 245 aa16.35■□□□□ 0.21
COL13A1-202ENST00000357811 TIMM8BQ9Y5J9 83 aaPredicted RBP16.35■□□□□ 0.21
COL13A1-202ENST00000357811 IGHV2-26A0A0B4J1V2 119 aa16.34■□□□□ 0.21
COL13A1-202ENST00000357811 RBP4P02753 201 aa16.34■□□□□ 0.21
COL13A1-202ENST00000357811 OR10J3Q5JRS4 329 aa16.34■□□□□ 0.21
COL13A1-202ENST00000357811 EXOC3-AS1Q8N2X6 119 aa16.34■□□□□ 0.21
COL13A1-202ENST00000357811 PERPQ96FX8 193 aa16.34■□□□□ 0.21
COL13A1-202ENST00000357811 PGLYRP4Q96LB8 373 aa16.34■□□□□ 0.21
COL13A1-202ENST00000357811 ZFP30Q9Y2G7 519 aa16.34■□□□□ 0.21
COL13A1-202ENST00000357811 HSBP1O75506 76 aa16.34■□□□□ 0.21
COL13A1-202ENST00000357811 TNFRSF13BO14836 293 aaPredicted RBP16.33■□□□□ 0.21
COL13A1-202ENST00000357811 HYPMO75409 117 aa16.33■□□□□ 0.21
COL13A1-202ENST00000357811 THAP8Q8NA92 274 aa16.33■□□□□ 0.21
COL13A1-202ENST00000357811 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.33■□□□□ 0.2
COL13A1-202ENST00000357811 Q56UQ5 140 aa16.33■□□□□ 0.2
COL13A1-202ENST00000357811 BORCS7Q96B45 105 aa16.33■□□□□ 0.2
COL13A1-202ENST00000357811 C20orf144Q9BQM9 153 aa16.33■□□□□ 0.2
COL13A1-202ENST00000357811 HRNRQ86YZ3 2850 aaPredicted RBP16.33■□□□□ 0.2
COL13A1-202ENST00000357811 MC5RP33032 325 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 Q6ZVH6 145 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 C22orf15Q8WYQ4 148 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 MBD6Q96DN6 1003 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 SIGLEC9Q9Y336 463 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 VSTM5A8MXK1 200 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 OR4A5Q8NH83 315 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 GRAMD2BQ96HH9 432 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 CLEC7AQ9BXN2 247 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 Q9H3A6 140 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 CLEC5AQ9NY25 188 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 NCOR2Q9Y618 2525 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 CHD8Q9HCK8 2581 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 FAM90A27PA6NNH2 459 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 PSG1P11464 419 aa16.32■□□□□ 0.2
COL13A1-202ENST00000357811 KLF17Q5JT82 389 aaPredicted RBP16.32■□□□□ 0.2
COL13A1-202ENST00000357811 CIARTQ8N365 385 aaPredicted RBP16.32■□□□□ 0.2
COL13A1-202ENST00000357811 IGHV1-3A0A0C4DH29 117 aa16.31■□□□□ 0.2
COL13A1-202ENST00000357811 SAPCD1Q5SSQ6 148 aa16.31■□□□□ 0.2
COL13A1-202ENST00000357811 TP73-AS1Q9UF72 201 aa16.31■□□□□ 0.2
COL13A1-202ENST00000357811 HILPDAQ9Y5L2 63 aa16.31■□□□□ 0.2
COL13A1-202ENST00000357811 SPTBN4Q9H254 2564 aa16.31■□□□□ 0.2
COL13A1-202ENST00000357811 M0R2Z0 102 aa16.31■□□□□ 0.2
COL13A1-202ENST00000357811 TXN2Q99757 166 aa16.31■□□□□ 0.2
COL13A1-202ENST00000357811 CNIH1O95406 144 aa16.3■□□□□ 0.2
COL13A1-202ENST00000357811 HIST1H1EP10412 219 aaKnown RBP16.3■□□□□ 0.2
COL13A1-202ENST00000357811 LGALS7P47929 136 aa16.3■□□□□ 0.2
COL13A1-202ENST00000357811 RBX1P62877 108 aa16.3■□□□□ 0.2
COL13A1-202ENST00000357811 PPP1R27Q86WC6 154 aa16.3■□□□□ 0.2
COL13A1-202ENST00000357811 LINC00311Q8N616 119 aa16.3■□□□□ 0.2
COL13A1-202ENST00000357811 RPEQ96AT9 228 aa16.3■□□□□ 0.2
COL13A1-202ENST00000357811 C17orf77Q96MU5 243 aa16.3■□□□□ 0.2
COL13A1-202ENST00000357811 ONECUT1Q9UBC0 465 aa16.3■□□□□ 0.2
COL13A1-202ENST00000357811 CCL25O15444 150 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 PRNTQ86SH4 94 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 GTSF1Q8WW33 167 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 GPR82Q96P67 336 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 MYCNOSP40205 109 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 ZNF138P52744 262 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 GOLT1AQ6ZVE7 132 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 STPG4Q8N801 248 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 INS-IGF2F8WCM5 200 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 FOXC1Q12948 553 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 Q6ZN92 141 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 ASCL5Q7RTU5 278 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 MCRIP2Q9BUT9 160 aaKnown RBP16.29■□□□□ 0.2
COL13A1-202ENST00000357811 C7orf69Q9H7B7 122 aa16.29■□□□□ 0.2
COL13A1-202ENST00000357811 LDLRAD2Q5SZI1 272 aa16.28■□□□□ 0.2
COL13A1-202ENST00000357811 EBLN2Q6P2I7 272 aa16.28■□□□□ 0.2
COL13A1-202ENST00000357811 SRSF12Q8WXF0 261 aaKnown RBP16.28■□□□□ 0.2
COL13A1-202ENST00000357811 PPIAL4CA0A0B4J2A2 164 aa16.28■□□□□ 0.2
COL13A1-202ENST00000357811 H0Y8G0 127 aa16.28■□□□□ 0.2
COL13A1-202ENST00000357811 BUB1B-PAK6H3BSN5 160 aa16.28■□□□□ 0.2
COL13A1-202ENST00000357811 P01737 135 aa16.28■□□□□ 0.2
COL13A1-202ENST00000357811 PPIAL4GP0DN37 164 aa16.28■□□□□ 0.2
COL13A1-202ENST00000357811 GP9P14770 177 aa16.28■□□□□ 0.2
COL13A1-202ENST00000357811 PRRX1P54821 245 aa16.28■□□□□ 0.2
COL13A1-202ENST00000357811 ALKBH7Q9BT30 221 aaPredicted RBP16.28■□□□□ 0.2
COL13A1-202ENST00000357811 OR4B1Q8NGF8 309 aa16.27■□□□□ 0.2
COL13A1-202ENST00000357811 TPPP3Q9BW30 176 aa16.27■□□□□ 0.2
COL13A1-202ENST00000357811 TCRAP04437 139 aa16.27■□□□□ 0.19
COL13A1-202ENST00000357811 DAZAP1Q96EP5 407 aaKnown RBP16.27■□□□□ 0.19
COL13A1-202ENST00000357811 TEX22C9J3V5 150 aa16.26■□□□□ 0.19
COL13A1-202ENST00000357811 CRYGCP07315 174 aa16.26■□□□□ 0.19
COL13A1-202ENST00000357811 ARF6P62330 175 aa16.26■□□□□ 0.19
COL13A1-202ENST00000357811 COX19Q49B96 90 aa16.26■□□□□ 0.19
COL13A1-202ENST00000357811 FAM231DQ6ZW35 169 aa16.26■□□□□ 0.19
COL13A1-202ENST00000357811 TMEM116Q8NCL8 245 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms