RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 TMEM183AQ8IXX5 376 aa13.14□□□□□ -0.31
SAMM50-201ENST00000350028 ZNF491Q8N8L2 437 aa13.14□□□□□ -0.31
SAMM50-201ENST00000350028 C5orf17Q8NAS9 161 aa13.14□□□□□ -0.31
SAMM50-201ENST00000350028 LINC00479Q96M42 142 aa13.14□□□□□ -0.31
SAMM50-201ENST00000350028 SHANK2-AS3Q9BTD1 123 aa13.14□□□□□ -0.31
SAMM50-201ENST00000350028 GPR61Q9BZJ8 451 aa13.14□□□□□ -0.31
SAMM50-201ENST00000350028 KLF12Q9Y4X4 402 aa13.14□□□□□ -0.31
SAMM50-201ENST00000350028 SPTAN1Q13813 2472 aaKnown RBP13.14□□□□□ -0.31
SAMM50-201ENST00000350028 CENPVL3A0A0U1RRI6 287 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 VWC2LB2RUY7 222 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 H3BRN7 92 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 IBA57Q5T440 356 aaKnown RBP13.13□□□□□ -0.31
SAMM50-201ENST00000350028 LEMD1Q68G75 181 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 CLEC2AQ6UVW9 174 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 FAM231DQ6ZW35 169 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 RNF125Q96EQ8 232 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 SMIM12Q96EX1 92 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 RNASE7Q9H1E1 156 aaKnown RBP13.13□□□□□ -0.31
SAMM50-201ENST00000350028 Q9H3A6 140 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 HELZ2Q9BYK8 2649 aaKnown RBP13.13□□□□□ -0.31
SAMM50-201ENST00000350028 XKRY2A2RUG3 117 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 SCGB2A1O75556 95 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 SNRPCP09234 159 aaKnown RBP13.13□□□□□ -0.31
SAMM50-201ENST00000350028 UBE2G1P62253 170 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 GNG5P63218 68 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 ATG101Q9BSB4 218 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 OTORQ9NRC9 128 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 C21orf62Q9NYP8 219 aa13.13□□□□□ -0.31
SAMM50-201ENST00000350028 TRAV34A0A0B4J273 112 aa13.12□□□□□ -0.31
SAMM50-201ENST00000350028 IGHV4-61A0A0C4DH41 118 aa13.12□□□□□ -0.31
SAMM50-201ENST00000350028 NDUFB8O95169 186 aa13.12□□□□□ -0.31
SAMM50-201ENST00000350028 Q56UQ5 140 aa13.12□□□□□ -0.31
SAMM50-201ENST00000350028 BPIFA4PQ86YQ2 179 aa13.12□□□□□ -0.31
SAMM50-201ENST00000350028 PIP4P2Q8N4L2 257 aa13.12□□□□□ -0.31
SAMM50-201ENST00000350028 FAM110DQ8TAY7 271 aaPredicted RBP13.12□□□□□ -0.31
SAMM50-201ENST00000350028 TXN2Q99757 166 aa13.12□□□□□ -0.31
SAMM50-201ENST00000350028 CHRDL1Q9BU40 450 aa13.12□□□□□ -0.31
SAMM50-201ENST00000350028 CRYBG3Q68DQ2 2970 aa13.11□□□□□ -0.31
SAMM50-201ENST00000350028 PCP4L1A6NKN8 68 aa13.11□□□□□ -0.31
SAMM50-201ENST00000350028 IL4P05112 153 aa13.11□□□□□ -0.31
SAMM50-201ENST00000350028 ATP5J2P56134 94 aa13.11□□□□□ -0.31
SAMM50-201ENST00000350028 KLK9Q2XQG4 91 aa13.11□□□□□ -0.31
SAMM50-201ENST00000350028 COX19Q49B96 90 aa13.11□□□□□ -0.31
SAMM50-201ENST00000350028 ZNF586Q9NXT0 402 aa13.11□□□□□ -0.31
SAMM50-201ENST00000350028 KLK9Q9UKQ9 250 aa13.11□□□□□ -0.31
SAMM50-201ENST00000350028 TRBV9A0A0B4J1U6 114 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 FCGR2BP31994 310 aaPredicted RBP13.1□□□□□ -0.31
SAMM50-201ENST00000350028 S100A12P80511 92 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 PDZD11Q5EBL8 140 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 OR8I2Q8N0Y5 310 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 OR4F17Q8NGA8 305 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 OR10D4PQ8NGN7 298 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 VN1R17PQ8TDU5 208 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 FMC1Q96HJ9 113 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 SERTAD4Q9NUC0 356 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 IGHV1-69DA0A0B4J2H0 117 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 SMIM27A0A1W2PRY6 76 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 ZNF705GA8MUZ8 300 aaPredicted RBP13.1□□□□□ -0.31
SAMM50-201ENST00000350028 F8W735 103 aaPredicted RBP13.1□□□□□ -0.31
SAMM50-201ENST00000350028 GATCO43716 136 aaKnown RBP13.1□□□□□ -0.31
SAMM50-201ENST00000350028 OR2J3O76001 311 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 IGHV1-69P01742 117 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 TCRAP04437 139 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 PLA2G2AP14555 144 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 GPR82Q96P67 336 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 HSPB9Q9BQS6 159 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 NIT2Q9NQR4 276 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 FBXL7Q9UJT9 491 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 S4R3C0 116 aa13.1□□□□□ -0.31
SAMM50-201ENST00000350028 UNQ5815/PRO19632Q6UWF5 114 aa13.09□□□□□ -0.31
SAMM50-201ENST00000350028 LYPD1Q8N2G4 141 aa13.09□□□□□ -0.31
SAMM50-201ENST00000350028 NHLRC2Q8NBF2 726 aa13.09□□□□□ -0.31
SAMM50-201ENST00000350028 WNK2Q9Y3S1 2297 aa13.09□□□□□ -0.31
SAMM50-201ENST00000350028 H3BTX0 84 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 FABP4P15090 132 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 CMTM2Q8TAZ6 248 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 MBD6Q96DN6 1003 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 GRAMD2BQ96HH9 432 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 HIST1H2BLQ99880 126 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 TMUB1Q9BVT8 246 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 GNB1LQ9BYB4 327 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 RPH3ALQ9UNE2 315 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 GCN1Q92616 2671 aaKnown RBP13.08□□□□□ -0.32
SAMM50-201ENST00000350028 TRBV19A0A075B6N1 114 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 IGLC2P0DOY2 106 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 WDR73Q6P4I2 378 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 NUDT10Q8NFP7 164 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 NUDT11Q96G61 164 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 C7orf69Q9H7B7 122 aa13.08□□□□□ -0.32
SAMM50-201ENST00000350028 TRBV6-1A0A0K0K1D8 114 aa13.07□□□□□ -0.32
SAMM50-201ENST00000350028 IZUMO1RA6ND01 250 aa13.07□□□□□ -0.32
SAMM50-201ENST00000350028 MRPS12O15235 138 aaKnown RBP13.07□□□□□ -0.32
SAMM50-201ENST00000350028 ATP6V0E1O15342 81 aa13.07□□□□□ -0.32
SAMM50-201ENST00000350028 MT-ND6P03923 174 aa13.07□□□□□ -0.32
SAMM50-201ENST00000350028 ADMP35318 185 aa13.07□□□□□ -0.32
SAMM50-201ENST00000350028 DSCR9P59020 149 aa13.07□□□□□ -0.32
SAMM50-201ENST00000350028 USF2Q15853 346 aaPredicted RBP13.07□□□□□ -0.32
SAMM50-201ENST00000350028 C5orf56Q8N8D9 126 aa13.07□□□□□ -0.32
SAMM50-201ENST00000350028 MLST8Q9BVC4 326 aa13.07□□□□□ -0.32
SAMM50-201ENST00000350028 MRPL18Q9H0U6 180 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms