RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 TOMM40O96008 361 aa11.34□□□□□ -0.59
TRIO-202ENST00000344204 LEAP2Q969E1 77 aa11.34□□□□□ -0.59
TRIO-202ENST00000344204 IGHV1-24A0A0C4DH33 117 aa11.34□□□□□ -0.59
TRIO-202ENST00000344204 LSM4Q9Y4Z0 139 aaKnown RBP11.34□□□□□ -0.59
TRIO-202ENST00000344204 TMEM196Q5HYL7 178 aa11.34□□□□□ -0.59
TRIO-202ENST00000344204 ASIPP42127 132 aa11.34□□□□□ -0.59
TRIO-202ENST00000344204 SLC25A53Q5H9E4 307 aa11.34□□□□□ -0.59
TRIO-202ENST00000344204 VGLL1Q99990 258 aa11.34□□□□□ -0.59
TRIO-202ENST00000344204 TREML4Q6UXN2 200 aa11.34□□□□□ -0.59
TRIO-202ENST00000344204 MCRIP2Q9BUT9 160 aaKnown RBP11.34□□□□□ -0.59
TRIO-202ENST00000344204 CPAMD8Q8IZJ3 1885 aa11.34□□□□□ -0.59
TRIO-202ENST00000344204 HAPLN4Q86UW8 402 aa11.34□□□□□ -0.59
TRIO-202ENST00000344204 C12orf77C9JDV5 145 aa11.33□□□□□ -0.59
TRIO-202ENST00000344204 F2Z2F3 143 aa11.33□□□□□ -0.59
TRIO-202ENST00000344204 ZNF415Q09FC8 603 aa11.33□□□□□ -0.59
TRIO-202ENST00000344204 ZNF497Q6ZNH5 498 aa11.33□□□□□ -0.59
TRIO-202ENST00000344204 LINC00271P0C7V0 271 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 PYYP10082 97 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 CEND1Q8N111 149 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 TMEM54Q969K7 222 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 SMIM10L1P0DMW3 83 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 MRAPQ8TCY5 172 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 SMIM10Q96HG1 83 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 OVOL2Q9BRP0 275 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 IDI2-AS1Q9NZ38 188 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 PPP1R27Q86WC6 154 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 IFNL4K9M1U5 179 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 ZNF319Q9P2F9 582 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 SLC25A15Q9Y619 301 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 H3BMG7 143 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 ZNF138P52744 262 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 ZC2HC1BQ5TFG8 222 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 SLC25A39Q9BZJ4 359 aaPredicted RBP11.33□□□□□ -0.6
TRIO-202ENST00000344204 ABCA2Q9BZC7 2435 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 SIVA1O15304 175 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 ZNF826PQ6ZT77 177 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 GFRA4Q9GZZ7 299 aa11.33□□□□□ -0.6
TRIO-202ENST00000344204 TCRBV4S1A1TA0A5B7 111 aa11.32□□□□□ -0.6
TRIO-202ENST00000344204 CCDC144NLQ6NUI1 221 aa11.32□□□□□ -0.6
TRIO-202ENST00000344204 LOXL2Q9Y4K0 774 aa11.32□□□□□ -0.6
TRIO-202ENST00000344204 TLN1Q9Y490 2541 aaKnown RBP11.32□□□□□ -0.6
TRIO-202ENST00000344204 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
TRIO-202ENST00000344204 FBXL15Q9H469 300 aa11.32□□□□□ -0.6
TRIO-202ENST00000344204 MESP2Q0VG99 397 aa11.32□□□□□ -0.6
TRIO-202ENST00000344204 TDHQ8IZJ6 230 aa11.32□□□□□ -0.6
TRIO-202ENST00000344204 FSCN3Q9NQT6 498 aa11.32□□□□□ -0.6
TRIO-202ENST00000344204 C9orf172C9J069 976 aa11.32□□□□□ -0.6
TRIO-202ENST00000344204 RPL15P61313 204 aaKnown RBP11.32□□□□□ -0.6
TRIO-202ENST00000344204 SPATA31B1PQ5VZV4 182 aa11.32□□□□□ -0.6
TRIO-202ENST00000344204 HIST1H4AP62805 103 aaKnown RBP11.31□□□□□ -0.6
TRIO-202ENST00000344204 F2RL2O00254 374 aa11.31□□□□□ -0.6
TRIO-202ENST00000344204 CNTFRP26992 372 aa11.31□□□□□ -0.6
TRIO-202ENST00000344204 FOXH1O75593 365 aa11.31□□□□□ -0.6
TRIO-202ENST00000344204 CCDC168Q8NDH2 2452 aa11.31□□□□□ -0.6
TRIO-202ENST00000344204 ADAMTS20P59510 1910 aa11.31□□□□□ -0.6
TRIO-202ENST00000344204 LOC102723996A0A087X1L8 192 aa11.31□□□□□ -0.6
TRIO-202ENST00000344204 NCR2O95944 276 aa11.31□□□□□ -0.6
TRIO-202ENST00000344204 ACP7Q6ZNF0 438 aa11.31□□□□□ -0.6
TRIO-202ENST00000344204 PPP1R32Q7Z5V6 425 aa11.31□□□□□ -0.6
TRIO-202ENST00000344204 IGHG4P01861 327 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 PLAURQ03405 335 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 TDRG1Q3Y452 100 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 SMIM27A0A1W2PRY6 76 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 IGLC1P0CG04 106 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 PEAR1Q5VY43 1037 aaPredicted RBP11.3□□□□□ -0.6
TRIO-202ENST00000344204 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 A0A0J9YW62 118 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
TRIO-202ENST00000344204 PRR31Q5SQ13 230 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 ZNF296Q8WUU4 475 aaPredicted RBP11.3□□□□□ -0.6
TRIO-202ENST00000344204 LIME1Q9H400 295 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 C22orf46C9J442 243 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 CXCL10P02778 98 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 CT83Q5H943 113 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 RCHY1Q96PM5 261 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 SPINT1O43278 529 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 IGLV3-21P80748 117 aaPredicted RBP11.3□□□□□ -0.6
TRIO-202ENST00000344204 OSR1Q8TAX0 266 aaPredicted RBP11.3□□□□□ -0.6
TRIO-202ENST00000344204 PTPRSQ13332 1948 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 BDP1A6H8Y1 2624 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 LPAL2Q16609 132 aa11.3□□□□□ -0.6
TRIO-202ENST00000344204 PLEKHB2Q96CS7 222 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 INAFM2P0DMQ5 153 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 KLRD1Q13241 179 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 SP9P0CG40 484 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 HIVEP3Q5T1R4 2406 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 IGKV3-7A0A075B6H7 116 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 PRRG2O14669 202 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 IGKV1-5P01602 117 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 LYZL4Q96KX0 146 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 CLUHP3Q96NS8 147 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 TLN2Q9Y4G6 2542 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 SRSF8Q9BRL6 282 aaKnown RBP11.29□□□□□ -0.6
TRIO-202ENST00000344204 CCL13Q99616 98 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 COL5A1P20908 1838 aaPredicted RBP11.29□□□□□ -0.6
TRIO-202ENST00000344204 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
TRIO-202ENST00000344204 WNT9BO14905 357 aa11.28□□□□□ -0.6
TRIO-202ENST00000344204 STPG1Q5TH74 334 aa11.28□□□□□ -0.6
TRIO-202ENST00000344204 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
TRIO-202ENST00000344204 ACACBO00763 2458 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms